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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.528952Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 123 / 3316537 151 / 2498449 1721 / 114162531 1347 / 109592465 123 / 3316537 151 / 2498449 1721 / 114162531 1347 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 3 / 57865 -- 3 / 83577 1 / 16077 3 / 57865 -- 3 / 83577
bone marrow   5 / 29891 11 / 5047110 17 / 4978364 0 / 14774 5 / 29891 11 / 5047110 17 / 4978364
brain 3 / 506301 6 / 200215 6 / 729526 156 / 4997811 3 / 506301 6 / 200215 6 / 729526 156 / 4997811
cartilage   4 / 37226 -- 19 / 778035 0 / 15965 4 / 37226 -- 19 / 778035
cerebellum 2 / 90353   1 / 90885 7 / 1495938 2 / 90353 0 / 0 1 / 90885 7 / 1495938
cerebrum 1 / 198932   -- -- 1 / 198932 0 / 3422 -- --
cervix   13 / 44577 -- -- 0 / 3888 13 / 44577 -- --
colon   10 / 151167 8 / 98089 27 / 643586 0 / 26551 10 / 151167 8 / 98089 27 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 9 / 246043   -- -- 9 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 7 / 128826 1 / 46440   25 / 12434232 7 / 128826 1 / 46440 0 / 85898 25 / 12434232
gastrointestinal tract 2 / 28803 2 / 12721   -- 2 / 28803 2 / 12721 0 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney 1 / 106627 2 / 89898 1 / 155372 2 / 100281 1 / 106627 2 / 89898 1 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 4 / 107249 3 / 66308 5 / 214987 4 / 96846 4 / 107249 3 / 66308 5 / 214987
lung 11 / 128150 8 / 170663 4 / 159917 4 / 159059 11 / 128150 8 / 170663 4 / 159917 4 / 159059
lymph node 17 / 62650 4 / 27007 182 / 5278419 29 / 4863489 17 / 62650 4 / 27007 182 / 5278419 29 / 4863489
lymphoreticular   2 / 44303 -- -- 0 / 17836 2 / 44303 -- --
mammary gland 1 / 46553 19 / 104307 465 / 43166038 469 / 30312656 1 / 46553 19 / 104307 465 / 43166038 469 / 30312656
muscle 1 / 74039     3 / 61270 1 / 74039 0 / 27691 0 / 107836 3 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   6 / 89988 3 / 94887 5 / 179472 0 / 11462 6 / 89988 3 / 94887 5 / 179472
pancreas   4 / 74930 12 / 85728 6 / 189999 0 / 7237 4 / 74930 12 / 85728 6 / 189999
pancreatic islet 2 / 96524   -- -- 2 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 24 / 241088   22 / 207348 -- 24 / 241088 0 / 39531 22 / 207348 --
pooled tissue 10 / 276455   -- -- 10 / 276455 0 / 0 -- --
prostate 2 / 79993 1 / 107080 3 / 266949 24 / 491794 2 / 79993 1 / 107080 3 / 266949 24 / 491794
retina 1 / 29438 -- 12 / 820326 1 / 88490 1 / 29438 -- 12 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 15 / 125377 312 / 26905847 417 / 34522313 4 / 73633 15 / 125377 312 / 26905847 417 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 46 / 6230144 -- -- -- 46 / 6230144 --
stomach 1 / 26641 1 / 65644 5 / 124767 12 / 448716 1 / 26641 1 / 65644 5 / 124767 12 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630   -- 112 / 12372003 2 / 143630 0 / 100058 -- 112 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 6 / 115938 4 / 124664 0 / 11737 1 / 32606 6 / 115938 4 / 124664
uncharacterized tissue 7 / 207932 33 / 479819     7 / 207932 33 / 479819 0 / 21833 0 / 51729
uterus 1 / 38063 6 / 133582 460 / 10193077 -- 1 / 38063 6 / 133582 460 / 10193077 --
vascular 2 / 46250 -- 130 / 13135050 -- 2 / 46250 -- 130 / 13135050 --
white blood cells -- -- 29 / 846268 -- -- -- 29 / 846268 --
whole body -- -- -- -- -- -- -- --