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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.528889Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 132 / 3316537 83 / 2498449 347 / 114162531 520 / 109592465 132 / 3316537 83 / 2498449 347 / 114162531 520 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 3 / 57865 -- 2 / 83577 1 / 16077 3 / 57865 -- 2 / 83577
bone marrow     4 / 5047110 23 / 4978364 0 / 14774 0 / 29891 4 / 5047110 23 / 4978364
brain 26 / 506301 7 / 200215 1 / 729526 12 / 4997811 26 / 506301 7 / 200215 1 / 729526 12 / 4997811
cartilage   1 / 37226 -- 2 / 778035 0 / 15965 1 / 37226 -- 2 / 778035
cerebellum 3 / 90353     5 / 1495938 3 / 90353 0 / 0 0 / 90885 5 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix   5 / 44577 -- -- 0 / 3888 5 / 44577 -- --
colon 1 / 26551 3 / 151167 1 / 98089 10 / 643586 1 / 26551 3 / 151167 1 / 98089 10 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 6 / 246043   -- -- 6 / 246043 0 / 38 -- --
endocrine 1 / 19564 1 / 2857 -- -- 1 / 19564 1 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 4 / 128826 1 / 46440   23 / 12434232 4 / 128826 1 / 46440 0 / 85898 23 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 1 / 76442   1 / 83063 -- 1 / 76442 0 / 1 1 / 83063 --
kidney 5 / 106627 3 / 89898 1 / 155372   5 / 106627 3 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 3 / 107249     2 / 96846 3 / 107249 0 / 66308 0 / 214987
lung 5 / 128150 4 / 170663   2 / 159059 5 / 128150 4 / 170663 0 / 159917 2 / 159059
lymph node 7 / 62650   22 / 5278419 8 / 4863489 7 / 62650 0 / 27007 22 / 5278419 8 / 4863489
lymphoreticular 1 / 17836 1 / 44303 -- -- 1 / 17836 1 / 44303 -- --
mammary gland 1 / 46553   31 / 43166038 216 / 30312656 1 / 46553 0 / 104307 31 / 43166038 216 / 30312656
muscle 3 / 74039 2 / 27691     3 / 74039 2 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   8 / 89988 1 / 94887 3 / 179472 0 / 11462 8 / 89988 1 / 94887 3 / 179472
pancreas   5 / 74930     0 / 7237 5 / 74930 0 / 85728 0 / 189999
pancreatic islet 3 / 96524   -- -- 3 / 96524 0 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 8 / 241088     -- 8 / 241088 0 / 39531 0 / 207348 --
pooled tissue 18 / 276455   -- -- 18 / 276455 0 / 0 -- --
prostate 2 / 79993 3 / 107080 1 / 266949 7 / 491794 2 / 79993 3 / 107080 1 / 266949 7 / 491794
retina 1 / 29438 -- 4 / 820326   1 / 29438 -- 4 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 6 / 73633 6 / 125377 114 / 26905847 133 / 34522313 6 / 73633 6 / 125377 114 / 26905847 133 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 44 / 6230144 -- -- -- 44 / 6230144 --
stomach 1 / 26641 1 / 65644   3 / 448716 1 / 26641 1 / 65644 0 / 124767 3 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 9 / 143630 1 / 100058 -- 71 / 12372003 9 / 143630 1 / 100058 -- 71 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid         0 / 11737 0 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 7 / 207932 16 / 479819     7 / 207932 16 / 479819 0 / 21833 0 / 51729
uterus 1 / 38063 6 / 133582 43 / 10193077 -- 1 / 38063 6 / 133582 43 / 10193077 --
vascular   -- 66 / 13135050 -- 0 / 46250 -- 66 / 13135050 --
white blood cells -- -- 13 / 846268 -- -- -- 13 / 846268 --
whole body -- -- -- -- -- -- -- --