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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.524648Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 617 / 3316537 420 / 2498449 6461 / 114162531 2931 / 109592465 617 / 3316537 420 / 2498449 6461 / 114162531 2931 / 109592465
adrenal cortex -- 3 / 9928 -- -- -- 3 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   10 / 57865 --   0 / 16077 10 / 57865 -- 0 / 83577
bone marrow 3 / 14774 5 / 29891 161 / 5047110 315 / 4978364 3 / 14774 5 / 29891 161 / 5047110 315 / 4978364
brain 78 / 506301 31 / 200215 28 / 729526 195 / 4997811 78 / 506301 31 / 200215 28 / 729526 195 / 4997811
cartilage 7 / 15965 8 / 37226 -- 37 / 778035 7 / 15965 8 / 37226 -- 37 / 778035
cerebellum 28 / 90353   3 / 90885 59 / 1495938 28 / 90353 0 / 0 3 / 90885 59 / 1495938
cerebrum 24 / 198932   -- -- 24 / 198932 0 / 3422 -- --
cervix 1 / 3888 11 / 44577 -- -- 1 / 3888 11 / 44577 -- --
colon 4 / 26551 24 / 151167   39 / 643586 4 / 26551 24 / 151167 0 / 98089 39 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 61 / 246043   -- -- 61 / 246043 0 / 38 -- --
endocrine 9 / 19564   -- -- 9 / 19564 0 / 2857 -- --
esophagus   6 / 17290 -- -- 0 / 270 6 / 17290 -- --
eye 10 / 128826 15 / 46440 6 / 85898 139 / 12434232 10 / 128826 15 / 46440 6 / 85898 139 / 12434232
gastrointestinal tract 17 / 28803 1 / 12721 2 / 45908 -- 17 / 28803 1 / 12721 2 / 45908 --
heart 19 / 76442   2 / 83063 -- 19 / 76442 0 / 1 2 / 83063 --
kidney 42 / 106627 21 / 89898 7 / 155372   42 / 106627 21 / 89898 7 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 10 / 96846 18 / 107249 1 / 66308 10 / 214987 10 / 96846 18 / 107249 1 / 66308 10 / 214987
lung 44 / 128150 21 / 170663 19 / 159917 15 / 159059 44 / 128150 21 / 170663 19 / 159917 15 / 159059
lymph node 8 / 62650 4 / 27007 199 / 5278419 38 / 4863489 8 / 62650 4 / 27007 199 / 5278419 38 / 4863489
lymphoreticular   6 / 44303 -- -- 0 / 17836 6 / 44303 -- --
mammary gland 8 / 46553 13 / 104307 4068 / 43166038 701 / 30312656 8 / 46553 13 / 104307 4068 / 43166038 701 / 30312656
muscle 1 / 74039 1 / 27691   2 / 61270 1 / 74039 1 / 27691 0 / 107836 2 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 2 / 11462 6 / 89988 2 / 94887 13 / 179472 2 / 11462 6 / 89988 2 / 94887 13 / 179472
pancreas 2 / 7237 3 / 74930 7 / 85728 18 / 189999 2 / 7237 3 / 74930 7 / 85728 18 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 6 / 13260   -- -- 6 / 13260 0 / 1358 -- --
placenta 17 / 241088 6 / 39531 3 / 207348 -- 17 / 241088 6 / 39531 3 / 207348 --
pooled tissue 19 / 276455   -- -- 19 / 276455 0 / 0 -- --
prostate 10 / 79993 6 / 107080 13 / 266949 24 / 491794 10 / 79993 6 / 107080 13 / 266949 24 / 491794
retina 1 / 29438 -- 17 / 820326   1 / 29438 -- 17 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 14 / 73633 12 / 125377 320 / 26905847 771 / 34522313 14 / 73633 12 / 125377 320 / 26905847 771 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 28 / 52939   -- -- 28 / 52939 0 / 5 -- --
stem cell -- -- 371 / 6230144 -- -- -- 371 / 6230144 --
stomach 6 / 26641 7 / 65644 12 / 124767 28 / 448716 6 / 26641 7 / 65644 12 / 124767 28 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 29 / 143630 36 / 100058 -- 513 / 12372003 29 / 143630 36 / 100058 -- 513 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   10 / 32606 5 / 115938 12 / 124664 0 / 11737 10 / 32606 5 / 115938 12 / 124664
uncharacterized tissue 83 / 207932 113 / 479819   2 / 51729 83 / 207932 113 / 479819 0 / 21833 2 / 51729
uterus 7 / 38063 21 / 133582 789 / 10193077 -- 7 / 38063 21 / 133582 789 / 10193077 --
vascular 10 / 46250 -- 285 / 13135050 -- 10 / 46250 -- 285 / 13135050 --
white blood cells -- -- 141 / 846268 -- -- -- 141 / 846268 --
whole body -- -- -- -- -- -- -- --