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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.522819Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 153 / 3316537 494 / 2498449 7801 / 114162531 9451 / 109592465 153 / 3316537 494 / 2498449 7801 / 114162531 9451 / 109592465
adrenal cortex -- 3 / 9928 -- -- -- 3 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 4 / 16077 8 / 57865 -- 1 / 83577 4 / 16077 8 / 57865 -- 1 / 83577
bone marrow 1 / 14774   47 / 5047110 160 / 4978364 1 / 14774 0 / 29891 47 / 5047110 160 / 4978364
brain 2 / 506301 46 / 200215 35 / 729526 1082 / 4997811 2 / 506301 46 / 200215 35 / 729526 1082 / 4997811
cartilage 1 / 15965 1 / 37226 -- 86 / 778035 1 / 15965 1 / 37226 -- 86 / 778035
cerebellum     2 / 90885 92 / 1495938 0 / 90353 0 / 0 2 / 90885 92 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix   15 / 44577 -- -- 0 / 3888 15 / 44577 -- --
colon 3 / 26551 45 / 151167 16 / 98089 203 / 643586 3 / 26551 45 / 151167 16 / 98089 203 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 22 / 246043   -- -- 22 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 15 / 128826 5 / 46440 1 / 85898 966 / 12434232 15 / 128826 5 / 46440 1 / 85898 966 / 12434232
gastrointestinal tract 1 / 28803 4 / 12721 1 / 45908 -- 1 / 28803 4 / 12721 1 / 45908 --
heart 4 / 76442   1 / 83063 -- 4 / 76442 0 / 1 1 / 83063 --
kidney 5 / 106627 33 / 89898 37 / 155372 25 / 100281 5 / 106627 33 / 89898 37 / 155372 25 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 11 / 107249 4 / 66308 23 / 214987 2 / 96846 11 / 107249 4 / 66308 23 / 214987
lung 5 / 128150 56 / 170663 25 / 159917 45 / 159059 5 / 128150 56 / 170663 25 / 159917 45 / 159059
lymph node 3 / 62650 1 / 27007 161 / 5278419 45 / 4863489 3 / 62650 1 / 27007 161 / 5278419 45 / 4863489
lymphoreticular   7 / 44303 -- -- 0 / 17836 7 / 44303 -- --
mammary gland   17 / 104307 3701 / 43166038 1927 / 30312656 0 / 46553 17 / 104307 3701 / 43166038 1927 / 30312656
muscle 2 / 74039 12 / 27691 7 / 107836 5 / 61270 2 / 74039 12 / 27691 7 / 107836 5 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 17 / 89988 21 / 94887 15 / 179472 1 / 11462 17 / 89988 21 / 94887 15 / 179472
pancreas   45 / 74930 23 / 85728 42 / 189999 0 / 7237 45 / 74930 23 / 85728 42 / 189999
pancreatic islet 2 / 96524   -- -- 2 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 16 / 241088 15 / 39531 15 / 207348 -- 16 / 241088 15 / 39531 15 / 207348 --
pooled tissue 20 / 276455   -- -- 20 / 276455 0 / 0 -- --
prostate 14 / 79993 23 / 107080 27 / 266949 90 / 491794 14 / 79993 23 / 107080 27 / 266949 90 / 491794
retina 3 / 29438 -- 31 / 820326 10 / 88490 3 / 29438 -- 31 / 820326 10 / 88490
salivary gland   3 / 10368 -- -- 0 / 2490 3 / 10368 -- --
skin 2 / 73633 56 / 125377 1743 / 26905847 3927 / 34522313 2 / 73633 56 / 125377 1743 / 26905847 3927 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 291 / 6230144 -- -- -- 291 / 6230144 --
stomach 3 / 26641 8 / 65644 20 / 124767 66 / 448716 3 / 26641 8 / 65644 20 / 124767 66 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630 3 / 100058 -- 622 / 12372003 4 / 143630 3 / 100058 -- 622 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     8 / 115938 8 / 124664 0 / 11737 0 / 32606 8 / 115938 8 / 124664
uncharacterized tissue 9 / 207932 37 / 479819 8 / 21833 11 / 51729 9 / 207932 37 / 479819 8 / 21833 11 / 51729
uterus 3 / 38063 21 / 133582 235 / 10193077 -- 3 / 38063 21 / 133582 235 / 10193077 --
vascular 2 / 46250 -- 1204 / 13135050 -- 2 / 46250 -- 1204 / 13135050 --
white blood cells -- -- 137 / 846268 -- -- -- 137 / 846268 --
whole body -- -- -- -- -- -- -- --