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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.520414Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 306 / 3316537 96 / 2498449 3098 / 114162531 4001 / 109592465 306 / 3316537 96 / 2498449 3098 / 114162531 4001 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 3 / 57865 -- 4 / 83577 1 / 16077 3 / 57865 -- 4 / 83577
bone marrow     88 / 5047110 49 / 4978364 0 / 14774 0 / 29891 88 / 5047110 49 / 4978364
brain 46 / 506301 6 / 200215 10 / 729526 366 / 4997811 46 / 506301 6 / 200215 10 / 729526 366 / 4997811
cartilage 4 / 15965 2 / 37226 -- 18 / 778035 4 / 15965 2 / 37226 -- 18 / 778035
cerebellum 2 / 90353   2 / 90885 54 / 1495938 2 / 90353 0 / 0 2 / 90885 54 / 1495938
cerebrum 26 / 198932   -- -- 26 / 198932 0 / 3422 -- --
cervix 2 / 3888 3 / 44577 -- -- 2 / 3888 3 / 44577 -- --
colon 2 / 26551 3 / 151167 7 / 98089 12 / 643586 2 / 26551 3 / 151167 7 / 98089 12 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 14 / 246043   -- -- 14 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus 1 / 270 5 / 17290 -- -- 1 / 270 5 / 17290 -- --
eye 4 / 128826 4 / 46440 2 / 85898 548 / 12434232 4 / 128826 4 / 46440 2 / 85898 548 / 12434232
gastrointestinal tract 8 / 28803     -- 8 / 28803 0 / 12721 0 / 45908 --
heart 6 / 76442   9 / 83063 -- 6 / 76442 0 / 1 9 / 83063 --
kidney 6 / 106627 8 / 89898 3 / 155372   6 / 106627 8 / 89898 3 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 5 / 96846 12 / 107249 4 / 66308 9 / 214987 5 / 96846 12 / 107249 4 / 66308 9 / 214987
lung 17 / 128150 6 / 170663 21 / 159917 5 / 159059 17 / 128150 6 / 170663 21 / 159917 5 / 159059
lymph node 4 / 62650 1 / 27007 135 / 5278419 45 / 4863489 4 / 62650 1 / 27007 135 / 5278419 45 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 1 / 46553 1 / 104307 372 / 43166038 1343 / 30312656 1 / 46553 1 / 104307 372 / 43166038 1343 / 30312656
muscle 14 / 74039   1 / 107836   14 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 3 / 89988 2 / 94887 2 / 179472 1 / 11462 3 / 89988 2 / 94887 2 / 179472
pancreas 2 / 7237 3 / 74930 1 / 85728 2 / 189999 2 / 7237 3 / 74930 1 / 85728 2 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system 2 / 14891   -- -- 2 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 25 / 241088 2 / 39531 12 / 207348 -- 25 / 241088 2 / 39531 12 / 207348 --
pooled tissue 13 / 276455   -- -- 13 / 276455 0 / 0 -- --
prostate 6 / 79993 1 / 107080 6 / 266949 11 / 491794 6 / 79993 1 / 107080 6 / 266949 11 / 491794
retina 1 / 29438 -- 18 / 820326   1 / 29438 -- 18 / 820326 0 / 88490
salivary gland 1 / 2490   -- -- 1 / 2490 0 / 10368 -- --
skin 5 / 73633 1 / 125377 1490 / 26905847 1384 / 34522313 5 / 73633 1 / 125377 1490 / 26905847 1384 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 9 / 52939   -- -- 9 / 52939 0 / 5 -- --
stem cell -- -- 199 / 6230144 -- -- -- 199 / 6230144 --
stomach 1 / 26641 2 / 65644 1 / 124767 9 / 448716 1 / 26641 2 / 65644 1 / 124767 9 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 2 / 100058 -- 132 / 12372003 3 / 143630 2 / 100058 -- 132 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     8 / 115938 7 / 124664 0 / 11737 0 / 32606 8 / 115938 7 / 124664
uncharacterized tissue 60 / 207932 22 / 479819 2 / 21833 1 / 51729 60 / 207932 22 / 479819 2 / 21833 1 / 51729
uterus 1 / 38063 4 / 133582 192 / 10193077 -- 1 / 38063 4 / 133582 192 / 10193077 --
vascular 3 / 46250 -- 469 / 13135050 -- 3 / 46250 -- 469 / 13135050 --
white blood cells -- -- 44 / 846268 -- -- -- 44 / 846268 --
whole body -- -- -- -- -- -- -- --