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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.516826Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 55 / 3316537 293 / 2498449 2848 / 114162531 5414 / 109592465 55 / 3316537 293 / 2498449 2848 / 114162531 5414 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   5 / 57865 --   0 / 16077 5 / 57865 -- 0 / 83577
bone marrow   9 / 29891 21 / 5047110 10 / 4978364 0 / 14774 9 / 29891 21 / 5047110 10 / 4978364
brain 4 / 506301 10 / 200215 6 / 729526 157 / 4997811 4 / 506301 10 / 200215 6 / 729526 157 / 4997811
cartilage   1 / 37226 -- 22 / 778035 0 / 15965 1 / 37226 -- 22 / 778035
cerebellum       28 / 1495938 0 / 90353 0 / 0 0 / 90885 28 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix   27 / 44577 -- -- 0 / 3888 27 / 44577 -- --
colon 1 / 26551 23 / 151167 1 / 98089 37 / 643586 1 / 26551 23 / 151167 1 / 98089 37 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 7 / 246043   -- -- 7 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   5 / 17290 -- -- 0 / 270 5 / 17290 -- --
eye 8 / 128826     168 / 12434232 8 / 128826 0 / 46440 0 / 85898 168 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 1 / 106627 20 / 89898   4 / 100281 1 / 106627 20 / 89898 0 / 155372 4 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 5 / 107249 2 / 66308 4 / 214987 2 / 96846 5 / 107249 2 / 66308 4 / 214987
lung 3 / 128150 28 / 170663 6 / 159917 1 / 159059 3 / 128150 28 / 170663 6 / 159917 1 / 159059
lymph node     109 / 5278419 23 / 4863489 0 / 62650 0 / 27007 109 / 5278419 23 / 4863489
lymphoreticular 6 / 17836   -- -- 6 / 17836 0 / 44303 -- --
mammary gland 4 / 46553 13 / 104307 393 / 43166038 2005 / 30312656 4 / 46553 13 / 104307 393 / 43166038 2005 / 30312656
muscle   25 / 27691     0 / 74039 25 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 3 / 89988   1 / 179472 1 / 11462 3 / 89988 0 / 94887 1 / 179472
pancreas   4 / 74930 8 / 85728 14 / 189999 0 / 7237 4 / 74930 8 / 85728 14 / 189999
pancreatic islet 2 / 96524   -- -- 2 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta   9 / 39531 2 / 207348 -- 0 / 241088 9 / 39531 2 / 207348 --
pooled tissue 6 / 276455   -- -- 6 / 276455 0 / 0 -- --
prostate 1 / 79993 9 / 107080 23 / 266949 19 / 491794 1 / 79993 9 / 107080 23 / 266949 19 / 491794
retina   -- 12 / 820326 1 / 88490 0 / 29438 -- 12 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 3 / 73633 24 / 125377 670 / 26905847 2457 / 34522313 3 / 73633 24 / 125377 670 / 26905847 2457 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 97 / 6230144 -- -- -- 97 / 6230144 --
stomach   10 / 65644 1 / 124767 17 / 448716 0 / 26641 10 / 65644 1 / 124767 17 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis     -- 370 / 12372003 0 / 143630 0 / 100058 -- 370 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   7 / 32606 1 / 115938 70 / 124664 0 / 11737 7 / 32606 1 / 115938 70 / 124664
uncharacterized tissue 4 / 207932 50 / 479819   6 / 51729 4 / 207932 50 / 479819 0 / 21833 6 / 51729
uterus   5 / 133582 64 / 10193077 -- 0 / 38063 5 / 133582 64 / 10193077 --
vascular 1 / 46250 -- 1427 / 13135050 -- 1 / 46250 -- 1427 / 13135050 --
white blood cells -- -- 5 / 846268 -- -- -- 5 / 846268 --
whole body -- -- -- -- -- -- -- --