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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.502875Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 533 / 3316537 416 / 2498449 3908 / 114162531 3881 / 109592465 533 / 3316537 416 / 2498449 3908 / 114162531 3881 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 3 / 57865 -- 6 / 83577 2 / 16077 3 / 57865 -- 6 / 83577
bone marrow 2 / 14774 3 / 29891 22 / 5047110 127 / 4978364 2 / 14774 3 / 29891 22 / 5047110 127 / 4978364
brain 102 / 506301 45 / 200215 19 / 729526 231 / 4997811 102 / 506301 45 / 200215 19 / 729526 231 / 4997811
cartilage 8 / 15965 2 / 37226 -- 30 / 778035 8 / 15965 2 / 37226 -- 30 / 778035
cerebellum 25 / 90353   1 / 90885 35 / 1495938 25 / 90353 0 / 0 1 / 90885 35 / 1495938
cerebrum 27 / 198932 1 / 3422 -- -- 27 / 198932 1 / 3422 -- --
cervix   9 / 44577 -- -- 0 / 3888 9 / 44577 -- --
colon 4 / 26551 24 / 151167 2 / 98089 49 / 643586 4 / 26551 24 / 151167 2 / 98089 49 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 21 / 246043   -- -- 21 / 246043 0 / 38 -- --
endocrine 5 / 19564   -- -- 5 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 9 / 128826 2 / 46440 4 / 85898 138 / 12434232 9 / 128826 2 / 46440 4 / 85898 138 / 12434232
gastrointestinal tract 12 / 28803     -- 12 / 28803 0 / 12721 0 / 45908 --
heart 7 / 76442   2 / 83063 -- 7 / 76442 0 / 1 2 / 83063 --
kidney 27 / 106627 9 / 89898 6 / 155372 5 / 100281 27 / 106627 9 / 89898 6 / 155372 5 / 100281
limb -- -- -- -- -- -- -- --
liver 9 / 96846 15 / 107249   6 / 214987 9 / 96846 15 / 107249 0 / 66308 6 / 214987
lung 20 / 128150 8 / 170663 6 / 159917 3 / 159059 20 / 128150 8 / 170663 6 / 159917 3 / 159059
lymph node 6 / 62650 9 / 27007 143 / 5278419 14 / 4863489 6 / 62650 9 / 27007 143 / 5278419 14 / 4863489
lymphoreticular 2 / 17836 19 / 44303 -- -- 2 / 17836 19 / 44303 -- --
mammary gland 10 / 46553 31 / 104307 2141 / 43166038 2191 / 30312656 10 / 46553 31 / 104307 2141 / 43166038 2191 / 30312656
muscle 6 / 74039 5 / 27691 1 / 107836 1 / 61270 6 / 74039 5 / 27691 1 / 107836 1 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   12 / 89988 7 / 94887 10 / 179472 0 / 11462 12 / 89988 7 / 94887 10 / 179472
pancreas   12 / 74930 2 / 85728 20 / 189999 0 / 7237 12 / 74930 2 / 85728 20 / 189999
pancreatic islet 8 / 96524 1 / 30072 -- -- 8 / 96524 1 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 29 / 241088 4 / 39531 5 / 207348 -- 29 / 241088 4 / 39531 5 / 207348 --
pooled tissue 16 / 276455   -- -- 16 / 276455 0 / 0 -- --
prostate 32 / 79993 11 / 107080 6 / 266949 19 / 491794 32 / 79993 11 / 107080 6 / 266949 19 / 491794
retina 3 / 29438 -- 11 / 820326 2 / 88490 3 / 29438 -- 11 / 820326 2 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin 20 / 73633 22 / 125377 491 / 26905847 862 / 34522313 20 / 73633 22 / 125377 491 / 26905847 862 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 41 / 52939   -- -- 41 / 52939 0 / 5 -- --
stem cell -- -- 77 / 6230144 -- -- -- 77 / 6230144 --
stomach 2 / 26641 13 / 65644 2 / 124767 12 / 448716 2 / 26641 13 / 65644 2 / 124767 12 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 11 / 143630 26 / 100058 -- 115 / 12372003 11 / 143630 26 / 100058 -- 115 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 2 / 11737 3 / 32606 4 / 115938 1 / 124664 2 / 11737 3 / 32606 4 / 115938 1 / 124664
uncharacterized tissue 50 / 207932 99 / 479819 2 / 21833 4 / 51729 50 / 207932 99 / 479819 2 / 21833 4 / 51729
uterus   25 / 133582 414 / 10193077 -- 0 / 38063 25 / 133582 414 / 10193077 --
vascular 14 / 46250 -- 492 / 13135050 -- 14 / 46250 -- 492 / 13135050 --
white blood cells -- -- 48 / 846268 -- -- -- 48 / 846268 --
whole body -- -- -- -- -- -- -- --