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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.502659Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 290 / 3316537 437 / 2498449 10883 / 114162531 10119 / 109592465 290 / 3316537 437 / 2498449 10883 / 114162531 10119 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 5 / 16077 9 / 57865 --   5 / 16077 9 / 57865 -- 0 / 83577
bone marrow 2 / 14774 1 / 29891 69 / 5047110 79 / 4978364 2 / 14774 1 / 29891 69 / 5047110 79 / 4978364
brain 27 / 506301 45 / 200215 94 / 729526 1465 / 4997811 27 / 506301 45 / 200215 94 / 729526 1465 / 4997811
cartilage 1 / 15965 5 / 37226 -- 80 / 778035 1 / 15965 5 / 37226 -- 80 / 778035
cerebellum 2 / 90353   2 / 90885 99 / 1495938 2 / 90353 0 / 0 2 / 90885 99 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon 6 / 26551 27 / 151167 36 / 98089 105 / 643586 6 / 26551 27 / 151167 36 / 98089 105 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 41 / 246043   -- -- 41 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 26 / 128826   4 / 85898 311 / 12434232 26 / 128826 0 / 46440 4 / 85898 311 / 12434232
gastrointestinal tract 2 / 28803 3 / 12721 4 / 45908 -- 2 / 28803 3 / 12721 4 / 45908 --
heart 12 / 76442   31 / 83063 -- 12 / 76442 0 / 1 31 / 83063 --
kidney 4 / 106627 25 / 89898 24 / 155372 21 / 100281 4 / 106627 25 / 89898 24 / 155372 21 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 26 / 107249 6 / 66308 59 / 214987 1 / 96846 26 / 107249 6 / 66308 59 / 214987
lung 13 / 128150 29 / 170663 57 / 159917 10 / 159059 13 / 128150 29 / 170663 57 / 159917 10 / 159059
lymph node   7 / 27007 193 / 5278419 36 / 4863489 0 / 62650 7 / 27007 193 / 5278419 36 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 1 / 46553 23 / 104307 978 / 43166038 3386 / 30312656 1 / 46553 23 / 104307 978 / 43166038 3386 / 30312656
muscle 3 / 74039 7 / 27691 2 / 107836 9 / 61270 3 / 74039 7 / 27691 2 / 107836 9 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 17 / 89988 49 / 94887 30 / 179472 1 / 11462 17 / 89988 49 / 94887 30 / 179472
pancreas   15 / 74930 3 / 85728 27 / 189999 0 / 7237 15 / 74930 3 / 85728 27 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid   13 / 20557 -- -- 0 / 24 13 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland   1 / 1358 -- -- 0 / 13260 1 / 1358 -- --
placenta 45 / 241088 10 / 39531 78 / 207348 -- 45 / 241088 10 / 39531 78 / 207348 --
pooled tissue 28 / 276455   -- -- 28 / 276455 0 / 0 -- --
prostate 14 / 79993 26 / 107080 141 / 266949 99 / 491794 14 / 79993 26 / 107080 141 / 266949 99 / 491794
retina 3 / 29438 -- 137 / 820326 2 / 88490 3 / 29438 -- 137 / 820326 2 / 88490
salivary gland   12 / 10368 -- -- 0 / 2490 12 / 10368 -- --
skin 12 / 73633 57 / 125377 1614 / 26905847 3299 / 34522313 12 / 73633 57 / 125377 1614 / 26905847 3299 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 248 / 6230144 -- -- -- 248 / 6230144 --
stomach 3 / 26641 8 / 65644 19 / 124767 136 / 448716 3 / 26641 8 / 65644 19 / 124767 136 / 448716
synovium   1 / 1650 -- -- 0 / 249 1 / 1650 -- --
testis 6 / 143630 6 / 100058 -- 787 / 12372003 6 / 143630 6 / 100058 -- 787 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737 5 / 32606 34 / 115938 56 / 124664 1 / 11737 5 / 32606 34 / 115938 56 / 124664
uncharacterized tissue 8 / 207932 33 / 479819 1 / 21833 23 / 51729 8 / 207932 33 / 479819 1 / 21833 23 / 51729
uterus 5 / 38063 21 / 133582 1281 / 10193077 -- 5 / 38063 21 / 133582 1281 / 10193077 --
vascular 2 / 46250 -- 5734 / 13135050 -- 2 / 46250 -- 5734 / 13135050 --
white blood cells -- -- 44 / 846268 -- -- -- 44 / 846268 --
whole body -- -- -- -- -- -- -- --