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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.502458Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 150 / 3316537 139 / 2498449 3829 / 114162531 1568 / 109592465 150 / 3316537 139 / 2498449 3829 / 114162531 1568 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 3 / 57865 -- 2 / 83577 1 / 16077 3 / 57865 -- 2 / 83577
bone marrow   5 / 29891 111 / 5047110 156 / 4978364 0 / 14774 5 / 29891 111 / 5047110 156 / 4978364
brain 26 / 506301 14 / 200215 14 / 729526 102 / 4997811 26 / 506301 14 / 200215 14 / 729526 102 / 4997811
cartilage   3 / 37226 -- 12 / 778035 0 / 15965 3 / 37226 -- 12 / 778035
cerebellum 4 / 90353   11 / 90885 44 / 1495938 4 / 90353 0 / 0 11 / 90885 44 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix   10 / 44577 -- -- 0 / 3888 10 / 44577 -- --
colon 1 / 26551 4 / 151167 9 / 98089 31 / 643586 1 / 26551 4 / 151167 9 / 98089 31 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 11 / 246043   -- -- 11 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 6 / 128826   1 / 85898 22 / 12434232 6 / 128826 0 / 46440 1 / 85898 22 / 12434232
gastrointestinal tract     1 / 45908 -- 0 / 28803 0 / 12721 1 / 45908 --
heart 5 / 76442     -- 5 / 76442 0 / 1 0 / 83063 --
kidney 3 / 106627 8 / 89898 2 / 155372   3 / 106627 8 / 89898 2 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 6 / 107249 2 / 66308 8 / 214987 2 / 96846 6 / 107249 2 / 66308 8 / 214987
lung 4 / 128150 24 / 170663 2 / 159917 4 / 159059 4 / 128150 24 / 170663 2 / 159917 4 / 159059
lymph node 15 / 62650   69 / 5278419 8 / 4863489 15 / 62650 0 / 27007 69 / 5278419 8 / 4863489
lymphoreticular 1 / 17836 2 / 44303 -- -- 1 / 17836 2 / 44303 -- --
mammary gland 1 / 46553 5 / 104307 2686 / 43166038 430 / 30312656 1 / 46553 5 / 104307 2686 / 43166038 430 / 30312656
muscle 4 / 74039   2 / 107836 4 / 61270 4 / 74039 0 / 27691 2 / 107836 4 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   4 / 89988 1 / 94887 9 / 179472 0 / 11462 4 / 89988 1 / 94887 9 / 179472
pancreas   2 / 74930 12 / 85728 11 / 189999 0 / 7237 2 / 74930 12 / 85728 11 / 189999
pancreatic islet 9 / 96524 1 / 30072 -- -- 9 / 96524 1 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 6 / 241088   2 / 207348 -- 6 / 241088 0 / 39531 2 / 207348 --
pooled tissue 27 / 276455   -- -- 27 / 276455 0 / 0 -- --
prostate 1 / 79993 3 / 107080 1 / 266949 16 / 491794 1 / 79993 3 / 107080 1 / 266949 16 / 491794
retina 2 / 29438 -- 29 / 820326 1 / 88490 2 / 29438 -- 29 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 2 / 73633 1 / 125377 536 / 26905847 649 / 34522313 2 / 73633 1 / 125377 536 / 26905847 649 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 22 / 6230144 -- -- -- 22 / 6230144 --
stomach   3 / 65644 3 / 124767 5 / 448716 0 / 26641 3 / 65644 3 / 124767 5 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 8 / 100058 -- 53 / 12372003 3 / 143630 8 / 100058 -- 53 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737 1 / 32606 4 / 115938 1 / 124664 1 / 11737 1 / 32606 4 / 115938 1 / 124664
uncharacterized tissue 5 / 207932 21 / 479819     5 / 207932 21 / 479819 0 / 21833 0 / 51729
uterus   11 / 133582 278 / 10193077 -- 0 / 38063 11 / 133582 278 / 10193077 --
vascular 1 / 46250 -- 18 / 13135050 -- 1 / 46250 -- 18 / 13135050 --
white blood cells -- -- 13 / 846268 -- -- -- 13 / 846268 --
whole body -- -- -- -- -- -- -- --