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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.500409Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 299 / 3316537 219 / 2498449 9911 / 114162531 13200 / 109592465 299 / 3316537 219 / 2498449 9911 / 114162531 13200 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   10 / 57865 --   0 / 16077 10 / 57865 -- 0 / 83577
bone marrow 1 / 14774 7 / 29891 20 / 5047110 45 / 4978364 1 / 14774 7 / 29891 20 / 5047110 45 / 4978364
brain 24 / 506301 9 / 200215 151 / 729526 1284 / 4997811 24 / 506301 9 / 200215 151 / 729526 1284 / 4997811
cartilage 2 / 15965 2 / 37226 -- 40 / 778035 2 / 15965 2 / 37226 -- 40 / 778035
cerebellum 2 / 90353   15 / 90885 150 / 1495938 2 / 90353 0 / 0 15 / 90885 150 / 1495938
cerebrum 18 / 198932   -- -- 18 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon 2 / 26551 12 / 151167 3 / 98089 83 / 643586 2 / 26551 12 / 151167 3 / 98089 83 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 19 / 246043   -- -- 19 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 10 / 128826 4 / 46440 3 / 85898 1111 / 12434232 10 / 128826 4 / 46440 3 / 85898 1111 / 12434232
gastrointestinal tract   2 / 12721 4 / 45908 -- 0 / 28803 2 / 12721 4 / 45908 --
heart 2 / 76442   8 / 83063 -- 2 / 76442 0 / 1 8 / 83063 --
kidney 26 / 106627 11 / 89898 12 / 155372 8 / 100281 26 / 106627 11 / 89898 12 / 155372 8 / 100281
limb -- -- -- -- -- -- -- --
liver 15 / 96846 14 / 107249 36 / 66308 32 / 214987 15 / 96846 14 / 107249 36 / 66308 32 / 214987
lung 8 / 128150 5 / 170663 24 / 159917 28 / 159059 8 / 128150 5 / 170663 24 / 159917 28 / 159059
lymph node 2 / 62650 6 / 27007 418 / 5278419 270 / 4863489 2 / 62650 6 / 27007 418 / 5278419 270 / 4863489
lymphoreticular   3 / 44303 -- -- 0 / 17836 3 / 44303 -- --
mammary gland 2 / 46553 13 / 104307 2649 / 43166038 2962 / 30312656 2 / 46553 13 / 104307 2649 / 43166038 2962 / 30312656
muscle 4 / 74039 1 / 27691 1 / 107836 3 / 61270 4 / 74039 1 / 27691 1 / 107836 3 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 1 / 11462 3 / 89988 6 / 94887 22 / 179472 1 / 11462 3 / 89988 6 / 94887 22 / 179472
pancreas 1 / 7237 6 / 74930 7 / 85728 25 / 189999 1 / 7237 6 / 74930 7 / 85728 25 / 189999
pancreatic islet 15 / 96524   -- -- 15 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 28 / 241088 1 / 39531 25 / 207348 -- 28 / 241088 1 / 39531 25 / 207348 --
pooled tissue 54 / 276455   -- -- 54 / 276455 0 / 0 -- --
prostate 6 / 79993 14 / 107080 24 / 266949 85 / 491794 6 / 79993 14 / 107080 24 / 266949 85 / 491794
retina 5 / 29438 -- 95 / 820326 8 / 88490 5 / 29438 -- 95 / 820326 8 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 14 / 73633 7 / 125377 3104 / 26905847 5243 / 34522313 14 / 73633 7 / 125377 3104 / 26905847 5243 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 433 / 6230144 -- -- -- 433 / 6230144 --
stomach 2 / 26641 8 / 65644 41 / 124767 84 / 448716 2 / 26641 8 / 65644 41 / 124767 84 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 6 / 143630 14 / 100058 -- 1675 / 12372003 6 / 143630 14 / 100058 -- 1675 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737 1 / 32606 29 / 115938 31 / 124664 1 / 11737 1 / 32606 29 / 115938 31 / 124664
uncharacterized tissue 13 / 207932 49 / 479819 2 / 21833 11 / 51729 13 / 207932 49 / 479819 2 / 21833 11 / 51729
uterus 3 / 38063 12 / 133582 1577 / 10193077 -- 3 / 38063 12 / 133582 1577 / 10193077 --
vascular 3 / 46250 -- 1177 / 13135050 -- 3 / 46250 -- 1177 / 13135050 --
white blood cells -- -- 47 / 846268 -- -- -- 47 / 846268 --
whole body -- -- -- -- -- -- -- --