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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.497579Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 151 / 3316537 75 / 2498449 1193 / 114162531 1074 / 109592465 151 / 3316537 75 / 2498449 1193 / 114162531 1074 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow 2 / 14774   3 / 5047110 5 / 4978364 2 / 14774 0 / 29891 3 / 5047110 5 / 4978364
brain 19 / 506301   1 / 729526 17 / 4997811 19 / 506301 0 / 200215 1 / 729526 17 / 4997811
cartilage   4 / 37226 -- 1 / 778035 0 / 15965 4 / 37226 -- 1 / 778035
cerebellum 2 / 90353     2 / 1495938 2 / 90353 0 / 0 0 / 90885 2 / 1495938
cerebrum 10 / 198932   -- -- 10 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon   3 / 151167   2 / 643586 0 / 26551 3 / 151167 0 / 98089 2 / 643586
ear 2 / 16130 -- -- -- 2 / 16130 -- -- --
embryonic tissue 1 / 246043   -- -- 1 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 3 / 128826   1 / 85898 72 / 12434232 3 / 128826 0 / 46440 1 / 85898 72 / 12434232
gastrointestinal tract     1 / 45908 -- 0 / 28803 0 / 12721 1 / 45908 --
heart 1 / 76442     -- 1 / 76442 0 / 1 0 / 83063 --
kidney 2 / 106627       2 / 106627 0 / 89898 0 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 4 / 107249   1 / 214987 1 / 96846 4 / 107249 0 / 66308 1 / 214987
lung 3 / 128150 9 / 170663   1 / 159059 3 / 128150 9 / 170663 0 / 159917 1 / 159059
lymph node 8 / 62650 1 / 27007 102 / 5278419 40 / 4863489 8 / 62650 1 / 27007 102 / 5278419 40 / 4863489
lymphoreticular 2 / 17836 1 / 44303 -- -- 2 / 17836 1 / 44303 -- --
mammary gland 1 / 46553 1 / 104307 126 / 43166038 255 / 30312656 1 / 46553 1 / 104307 126 / 43166038 255 / 30312656
muscle 2 / 74039   1 / 107836   2 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   1 / 89988   2 / 179472 0 / 11462 1 / 89988 0 / 94887 2 / 179472
pancreas   2 / 74930     0 / 7237 2 / 74930 0 / 85728 0 / 189999
pancreatic islet 11 / 96524   -- -- 11 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 2 / 241088     -- 2 / 241088 0 / 39531 0 / 207348 --
pooled tissue 22 / 276455   -- -- 22 / 276455 0 / 0 -- --
prostate 1 / 79993 1 / 107080 1 / 266949 3 / 491794 1 / 79993 1 / 107080 1 / 266949 3 / 491794
retina   -- 7 / 820326 2 / 88490 0 / 29438 -- 7 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   2 / 125377 655 / 26905847 567 / 34522313 0 / 73633 2 / 125377 655 / 26905847 567 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 14 / 52939   -- -- 14 / 52939 0 / 5 -- --
stem cell -- -- 25 / 6230144 -- -- -- 25 / 6230144 --
stomach 1 / 26641 1 / 65644   4 / 448716 1 / 26641 1 / 65644 0 / 124767 4 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 1 / 143630 3 / 100058 -- 100 / 12372003 1 / 143630 3 / 100058 -- 100 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   3 / 32606 1 / 115938   0 / 11737 3 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 40 / 207932 29 / 479819     40 / 207932 29 / 479819 0 / 21833 0 / 51729
uterus   6 / 133582 74 / 10193077 -- 0 / 38063 6 / 133582 74 / 10193077 --
vascular   -- 136 / 13135050 -- 0 / 46250 -- 136 / 13135050 --
white blood cells -- -- 59 / 846268 -- -- -- 59 / 846268 --
whole body -- -- -- -- -- -- -- --