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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.495473Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 134 / 3316537 93 / 2498449 5117 / 114162531 4124 / 109592465 134 / 3316537 93 / 2498449 5117 / 114162531 4124 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 -- 1 / 83577 0 / 16077 1 / 57865 -- 1 / 83577
bone marrow   1 / 29891 40 / 5047110 6 / 4978364 0 / 14774 1 / 29891 40 / 5047110 6 / 4978364
brain 23 / 506301 26 / 200215 24 / 729526 578 / 4997811 23 / 506301 26 / 200215 24 / 729526 578 / 4997811
cartilage   3 / 37226 -- 5 / 778035 0 / 15965 3 / 37226 -- 5 / 778035
cerebellum     1 / 90885 78 / 1495938 0 / 90353 0 / 0 1 / 90885 78 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 2 / 26551 9 / 151167   10 / 643586 2 / 26551 9 / 151167 0 / 98089 10 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 20 / 246043   -- -- 20 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 4 / 128826   12 / 85898 225 / 12434232 4 / 128826 0 / 46440 12 / 85898 225 / 12434232
gastrointestinal tract   1 / 12721 1 / 45908 -- 0 / 28803 1 / 12721 1 / 45908 --
heart 8 / 76442   3 / 83063 -- 8 / 76442 0 / 1 3 / 83063 --
kidney 3 / 106627 1 / 89898 4 / 155372 2 / 100281 3 / 106627 1 / 89898 4 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver   2 / 107249 1 / 66308 6 / 214987 0 / 96846 2 / 107249 1 / 66308 6 / 214987
lung 5 / 128150 4 / 170663 15 / 159917 4 / 159059 5 / 128150 4 / 170663 15 / 159917 4 / 159059
lymph node 24 / 62650   138 / 5278419 28 / 4863489 24 / 62650 0 / 27007 138 / 5278419 28 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 1 / 46553 2 / 104307 600 / 43166038 1279 / 30312656 1 / 46553 2 / 104307 600 / 43166038 1279 / 30312656
muscle   1 / 27691   2 / 61270 0 / 74039 1 / 27691 0 / 107836 2 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   5 / 89988   1 / 179472 0 / 11462 5 / 89988 0 / 94887 1 / 179472
pancreas   4 / 74930 2 / 85728 6 / 189999 0 / 7237 4 / 74930 2 / 85728 6 / 189999
pancreatic islet 3 / 96524 2 / 30072 -- -- 3 / 96524 2 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 4 / 241088   3 / 207348 -- 4 / 241088 0 / 39531 3 / 207348 --
pooled tissue 5 / 276455   -- -- 5 / 276455 0 / 0 -- --
prostate 3 / 79993   14 / 266949 4 / 491794 3 / 79993 0 / 107080 14 / 266949 4 / 491794
retina 3 / 29438 -- 30 / 820326 1 / 88490 3 / 29438 -- 30 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633   1899 / 26905847 1527 / 34522313 4 / 73633 0 / 125377 1899 / 26905847 1527 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 153 / 6230144 -- -- -- 153 / 6230144 --
stomach   6 / 65644 2 / 124767 16 / 448716 0 / 26641 6 / 65644 2 / 124767 16 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 1 / 143630 1 / 100058 -- 341 / 12372003 1 / 143630 1 / 100058 -- 341 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737 1 / 32606 8 / 115938 2 / 124664 1 / 11737 1 / 32606 8 / 115938 2 / 124664
uncharacterized tissue 8 / 207932 18 / 479819   2 / 51729 8 / 207932 18 / 479819 0 / 21833 2 / 51729
uterus 5 / 38063 3 / 133582 335 / 10193077 -- 5 / 38063 3 / 133582 335 / 10193077 --
vascular 2 / 46250 -- 1812 / 13135050 -- 2 / 46250 -- 1812 / 13135050 --
white blood cells -- -- 20 / 846268 -- -- -- 20 / 846268 --
whole body -- -- -- -- -- -- -- --