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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.493709Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 245 / 3316537 216 / 2498449 7528 / 114162531 5266 / 109592465 245 / 3316537 216 / 2498449 7528 / 114162531 5266 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 1 / 57865 -- 2 / 83577 1 / 16077 1 / 57865 -- 2 / 83577
bone marrow 1 / 14774 1 / 29891 156 / 5047110 62 / 4978364 1 / 14774 1 / 29891 156 / 5047110 62 / 4978364
brain 40 / 506301 16 / 200215 37 / 729526 271 / 4997811 40 / 506301 16 / 200215 37 / 729526 271 / 4997811
cartilage     -- 30 / 778035 0 / 15965 0 / 37226 -- 30 / 778035
cerebellum 18 / 90353   1 / 90885 74 / 1495938 18 / 90353 0 / 0 1 / 90885 74 / 1495938
cerebrum 40 / 198932   -- -- 40 / 198932 0 / 3422 -- --
cervix   7 / 44577 -- -- 0 / 3888 7 / 44577 -- --
colon   11 / 151167 7 / 98089 15 / 643586 0 / 26551 11 / 151167 7 / 98089 15 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 13 / 246043   -- -- 13 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 4 / 128826 3 / 46440 6 / 85898 1309 / 12434232 4 / 128826 3 / 46440 6 / 85898 1309 / 12434232
gastrointestinal tract   2 / 12721 2 / 45908 -- 0 / 28803 2 / 12721 2 / 45908 --
heart 3 / 76442   2 / 83063 -- 3 / 76442 0 / 1 2 / 83063 --
kidney 9 / 106627 2 / 89898 6 / 155372 2 / 100281 9 / 106627 2 / 89898 6 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 5 / 96846   1 / 66308 6 / 214987 5 / 96846 0 / 107249 1 / 66308 6 / 214987
lung 4 / 128150 5 / 170663 10 / 159917 5 / 159059 4 / 128150 5 / 170663 10 / 159917 5 / 159059
lymph node 8 / 62650 2 / 27007 170 / 5278419 47 / 4863489 8 / 62650 2 / 27007 170 / 5278419 47 / 4863489
lymphoreticular   8 / 44303 -- -- 0 / 17836 8 / 44303 -- --
mammary gland 12 / 46553 4 / 104307 5151 / 43166038 1221 / 30312656 12 / 46553 4 / 104307 5151 / 43166038 1221 / 30312656
muscle 10 / 74039 3 / 27691 3 / 107836 1 / 61270 10 / 74039 3 / 27691 3 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   27 / 89988 5 / 94887 12 / 179472 0 / 11462 27 / 89988 5 / 94887 12 / 179472
pancreas   5 / 74930 3 / 85728 9 / 189999 0 / 7237 5 / 74930 3 / 85728 9 / 189999
pancreatic islet 3 / 96524 4 / 30072 -- -- 3 / 96524 4 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 18 / 241088   4 / 207348 -- 18 / 241088 0 / 39531 4 / 207348 --
pooled tissue 13 / 276455   -- -- 13 / 276455 0 / 0 -- --
prostate 6 / 79993 19 / 107080 7 / 266949 10 / 491794 6 / 79993 19 / 107080 7 / 266949 10 / 491794
retina   -- 21 / 820326 3 / 88490 0 / 29438 -- 21 / 820326 3 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 9 / 125377 729 / 26905847 1654 / 34522313 4 / 73633 9 / 125377 729 / 26905847 1654 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 300 / 6230144 -- -- -- 300 / 6230144 --
stomach 1 / 26641 3 / 65644 4 / 124767 7 / 448716 1 / 26641 3 / 65644 4 / 124767 7 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 7 / 143630 18 / 100058 -- 522 / 12372003 7 / 143630 18 / 100058 -- 522 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 4 / 115938 2 / 124664 0 / 11737 1 / 32606 4 / 115938 2 / 124664
uncharacterized tissue 16 / 207932 59 / 479819 1 / 21833 2 / 51729 16 / 207932 59 / 479819 1 / 21833 2 / 51729
uterus 6 / 38063 5 / 133582 358 / 10193077 -- 6 / 38063 5 / 133582 358 / 10193077 --
vascular   -- 491 / 13135050 -- 0 / 46250 -- 491 / 13135050 --
white blood cells -- -- 49 / 846268 -- -- -- 49 / 846268 --
whole body -- -- -- -- -- -- -- --