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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.488293Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 227 / 3316537 124 / 2498449 223 / 114162531 211 / 109592465 227 / 3316537 124 / 2498449 223 / 114162531 211 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   2 / 57865 --   0 / 16077 2 / 57865 -- 0 / 83577
bone marrow     1 / 5047110 14 / 4978364 0 / 14774 0 / 29891 1 / 5047110 14 / 4978364
brain 7 / 506301 21 / 200215 1 / 729526 80 / 4997811 7 / 506301 21 / 200215 1 / 729526 80 / 4997811
cartilage 1 / 15965 2 / 37226 -- 31 / 778035 1 / 15965 2 / 37226 -- 31 / 778035
cerebellum         0 / 90353 0 / 0 0 / 90885 0 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon   7 / 151167 3 / 98089 9 / 643586 0 / 26551 7 / 151167 3 / 98089 9 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 4 / 246043   -- -- 4 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 4 / 128826       4 / 128826 0 / 46440 0 / 85898 0 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 3 / 76442     -- 3 / 76442 0 / 1 0 / 83063 --
kidney 2 / 106627 3 / 89898     2 / 106627 3 / 89898 0 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 1 / 107249   1 / 214987 1 / 96846 1 / 107249 0 / 66308 1 / 214987
lung 4 / 128150 15 / 170663 4 / 159917 5 / 159059 4 / 128150 15 / 170663 4 / 159917 5 / 159059
lymph node         0 / 62650 0 / 27007 0 / 5278419 0 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 27 / 46553 5 / 104307 202 / 43166038 21 / 30312656 27 / 46553 5 / 104307 202 / 43166038 21 / 30312656
muscle 6 / 74039       6 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 9 / 89988 1 / 94887 28 / 179472 1 / 11462 9 / 89988 1 / 94887 28 / 179472
pancreas       8 / 189999 0 / 7237 0 / 74930 0 / 85728 8 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 94 / 241088 1 / 39531 2 / 207348 -- 94 / 241088 1 / 39531 2 / 207348 --
pooled tissue 27 / 276455   -- -- 27 / 276455 0 / 0 -- --
prostate 13 / 79993 7 / 107080   10 / 491794 13 / 79993 7 / 107080 0 / 266949 10 / 491794
retina 9 / 29438 -- 3 / 820326   9 / 29438 -- 3 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 7 / 73633   5 / 26905847   7 / 73633 0 / 125377 5 / 26905847 0 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 1 / 6230144 -- -- -- 1 / 6230144 --
stomach 2 / 26641 3 / 65644   1 / 448716 2 / 26641 3 / 65644 0 / 124767 1 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 1 / 100058 -- 3 / 12372003 3 / 143630 1 / 100058 -- 3 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   4 / 32606     0 / 11737 4 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 1 / 207932 35 / 479819     1 / 207932 35 / 479819 0 / 21833 0 / 51729
uterus 2 / 38063 4 / 133582   -- 2 / 38063 4 / 133582 0 / 10193077 --
vascular 2 / 46250 --   -- 2 / 46250 -- 0 / 13135050 --
white blood cells -- --   -- -- -- 0 / 846268 --
whole body -- -- -- -- -- -- -- --