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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.487994Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 105 / 3316537 93 / 2498449 249 / 114162531 256 / 109592465 105 / 3316537 93 / 2498449 249 / 114162531 256 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 5 / 57865 --   2 / 16077 5 / 57865 -- 0 / 83577
bone marrow 1 / 14774   1 / 5047110 6 / 4978364 1 / 14774 0 / 29891 1 / 5047110 6 / 4978364
brain 31 / 506301 4 / 200215   54 / 4997811 31 / 506301 4 / 200215 0 / 729526 54 / 4997811
cartilage   5 / 37226 --   0 / 15965 5 / 37226 -- 0 / 778035
cerebellum 1 / 90353   1 / 90885 4 / 1495938 1 / 90353 0 / 0 1 / 90885 4 / 1495938
cerebrum 6 / 198932   -- -- 6 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   12 / 151167   2 / 643586 0 / 26551 12 / 151167 0 / 98089 2 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 1 / 246043   -- -- 1 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 6 / 128826 1 / 46440   5 / 12434232 6 / 128826 1 / 46440 0 / 85898 5 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 4 / 76442     -- 4 / 76442 0 / 1 0 / 83063 --
kidney 7 / 106627 4 / 89898     7 / 106627 4 / 89898 0 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver   2 / 107249 1 / 66308   0 / 96846 2 / 107249 1 / 66308 0 / 214987
lung 3 / 128150 2 / 170663   1 / 159059 3 / 128150 2 / 170663 0 / 159917 1 / 159059
lymph node 4 / 62650   58 / 5278419 2 / 4863489 4 / 62650 0 / 27007 58 / 5278419 2 / 4863489
lymphoreticular   4 / 44303 -- -- 0 / 17836 4 / 44303 -- --
mammary gland 14 / 46553 2 / 104307 52 / 43166038 111 / 30312656 14 / 46553 2 / 104307 52 / 43166038 111 / 30312656
muscle     1 / 107836   0 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 3 / 89988 1 / 94887   1 / 11462 3 / 89988 1 / 94887 0 / 179472
pancreas   4 / 74930     0 / 7237 4 / 74930 0 / 85728 0 / 189999
pancreatic islet 1 / 96524 3 / 30072 -- -- 1 / 96524 3 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 1 / 241088 1 / 39531   -- 1 / 241088 1 / 39531 0 / 207348 --
pooled tissue 6 / 276455   -- -- 6 / 276455 0 / 0 -- --
prostate   2 / 107080 1 / 266949 1 / 491794 0 / 79993 2 / 107080 1 / 266949 1 / 491794
retina   -- 3 / 820326   0 / 29438 -- 3 / 820326 0 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin   1 / 125377 55 / 26905847 56 / 34522313 0 / 73633 1 / 125377 55 / 26905847 56 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 4 / 6230144 -- -- -- 4 / 6230144 --
stomach   15 / 65644 5 / 124767 1 / 448716 0 / 26641 15 / 65644 5 / 124767 1 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 4 / 100058 -- 13 / 12372003 3 / 143630 4 / 100058 -- 13 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid         0 / 11737 0 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 8 / 207932 14 / 479819     8 / 207932 14 / 479819 0 / 21833 0 / 51729
uterus   4 / 133582 61 / 10193077 -- 0 / 38063 4 / 133582 61 / 10193077 --
vascular   -- 3 / 13135050 -- 0 / 46250 -- 3 / 13135050 --
white blood cells -- -- 2 / 846268 -- -- -- 2 / 846268 --
whole body -- -- -- -- -- -- -- --