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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.487036Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 67 / 3316537 40 / 2498449 1889 / 114162531 2910 / 109592465 67 / 3316537 40 / 2498449 1889 / 114162531 2910 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow     46 / 5047110 4 / 4978364 0 / 14774 0 / 29891 46 / 5047110 4 / 4978364
brain 4 / 506301 1 / 200215 2 / 729526 54 / 4997811 4 / 506301 1 / 200215 2 / 729526 54 / 4997811
cartilage   1 / 37226 -- 1 / 778035 0 / 15965 1 / 37226 -- 1 / 778035
cerebellum     2 / 90885 10 / 1495938 0 / 90353 0 / 0 2 / 90885 10 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix 1 / 3888 1 / 44577 -- -- 1 / 3888 1 / 44577 -- --
colon   6 / 151167   6 / 643586 0 / 26551 6 / 151167 0 / 98089 6 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 5 / 246043   -- -- 5 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 3 / 128826   1 / 85898 314 / 12434232 3 / 128826 0 / 46440 1 / 85898 314 / 12434232
gastrointestinal tract     1 / 45908 -- 0 / 28803 0 / 12721 1 / 45908 --
heart     1 / 83063 -- 0 / 76442 0 / 1 1 / 83063 --
kidney   1 / 89898 4 / 155372   0 / 106627 1 / 89898 4 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver       4 / 214987 0 / 96846 0 / 107249 0 / 66308 4 / 214987
lung 3 / 128150 4 / 170663 4 / 159917 3 / 159059 3 / 128150 4 / 170663 4 / 159917 3 / 159059
lymph node     20 / 5278419 58 / 4863489 0 / 62650 0 / 27007 20 / 5278419 58 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 6 / 46553 3 / 104307 29 / 43166038 469 / 30312656 6 / 46553 3 / 104307 29 / 43166038 469 / 30312656
muscle 3 / 74039       3 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   1 / 89988     0 / 11462 1 / 89988 0 / 94887 0 / 179472
pancreas     5 / 85728 3 / 189999 0 / 7237 0 / 74930 5 / 85728 3 / 189999
pancreatic islet 11 / 96524   -- -- 11 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 5 / 241088     -- 5 / 241088 0 / 39531 0 / 207348 --
pooled tissue 10 / 276455   -- -- 10 / 276455 0 / 0 -- --
prostate 5 / 79993 3 / 107080 6 / 266949 5 / 491794 5 / 79993 3 / 107080 6 / 266949 5 / 491794
retina 1 / 29438 -- 5 / 820326 1 / 88490 1 / 29438 -- 5 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin     915 / 26905847 944 / 34522313 0 / 73633 0 / 125377 915 / 26905847 944 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 131 / 6230144 -- -- -- 131 / 6230144 --
stomach 1 / 26641 4 / 65644 6 / 124767 4 / 448716 1 / 26641 4 / 65644 6 / 124767 4 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630   -- 1016 / 12372003 2 / 143630 0 / 100058 -- 1016 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     5 / 115938 13 / 124664 0 / 11737 0 / 32606 5 / 115938 13 / 124664
uncharacterized tissue 3 / 207932 6 / 479819   1 / 51729 3 / 207932 6 / 479819 0 / 21833 1 / 51729
uterus 2 / 38063 7 / 133582 350 / 10193077 -- 2 / 38063 7 / 133582 350 / 10193077 --
vascular   -- 355 / 13135050 -- 0 / 46250 -- 355 / 13135050 --
white blood cells -- -- 1 / 846268 -- -- -- 1 / 846268 --
whole body -- -- -- -- -- -- -- --