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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.485729Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 80 / 3316537 11 / 2498449 20611 / 114162531 6154 / 109592465 80 / 3316537 11 / 2498449 20611 / 114162531 6154 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow     31 / 5047110 28 / 4978364 0 / 14774 0 / 29891 31 / 5047110 28 / 4978364
brain 34 / 506301 1 / 200215 12 / 729526 123 / 4997811 34 / 506301 1 / 200215 12 / 729526 123 / 4997811
cartilage     -- 24 / 778035 0 / 15965 0 / 37226 -- 24 / 778035
cerebellum 28 / 90353     19 / 1495938 28 / 90353 0 / 0 0 / 90885 19 / 1495938
cerebrum 7 / 198932   -- -- 7 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon     5 / 98089 121 / 643586 0 / 26551 0 / 151167 5 / 98089 121 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue     -- -- 0 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye     4 / 85898 56 / 12434232 0 / 128826 0 / 46440 4 / 85898 56 / 12434232
gastrointestinal tract 1 / 28803   1 / 45908 -- 1 / 28803 0 / 12721 1 / 45908 --
heart     2 / 83063 -- 0 / 76442 0 / 1 2 / 83063 --
kidney   4 / 89898 5 / 155372 7 / 100281 0 / 106627 4 / 89898 5 / 155372 7 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846     20 / 214987 1 / 96846 0 / 107249 0 / 66308 20 / 214987
lung   5 / 170663 8 / 159917 8 / 159059 0 / 128150 5 / 170663 8 / 159917 8 / 159059
lymph node     271 / 5278419 25 / 4863489 0 / 62650 0 / 27007 271 / 5278419 25 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland   1 / 104307 18419 / 43166038 2866 / 30312656 0 / 46553 1 / 104307 18419 / 43166038 2866 / 30312656
muscle 1 / 74039   4 / 107836 3 / 61270 1 / 74039 0 / 27691 4 / 107836 3 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     15 / 94887 14 / 179472 0 / 11462 0 / 89988 15 / 94887 14 / 179472
pancreas     5 / 85728 9 / 189999 0 / 7237 0 / 74930 5 / 85728 9 / 189999
pancreatic islet 1 / 96524   -- -- 1 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta     8 / 207348 -- 0 / 241088 0 / 39531 8 / 207348 --
pooled tissue 1 / 276455   -- -- 1 / 276455 0 / 0 -- --
prostate 1 / 79993   14 / 266949 25 / 491794 1 / 79993 0 / 107080 14 / 266949 25 / 491794
retina 2 / 29438 -- 10 / 820326 2 / 88490 2 / 29438 -- 10 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin     942 / 26905847 2415 / 34522313 0 / 73633 0 / 125377 942 / 26905847 2415 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 72 / 6230144 -- -- -- 72 / 6230144 --
stomach     19 / 124767 47 / 448716 0 / 26641 0 / 65644 19 / 124767 47 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 1 / 143630   -- 333 / 12372003 1 / 143630 0 / 100058 -- 333 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737   6 / 115938 5 / 124664 1 / 11737 0 / 32606 6 / 115938 5 / 124664
uncharacterized tissue     2 / 21833 4 / 51729 0 / 207932 0 / 479819 2 / 21833 4 / 51729
uterus     345 / 10193077 -- 0 / 38063 0 / 133582 345 / 10193077 --
vascular   -- 304 / 13135050 -- 0 / 46250 -- 304 / 13135050 --
white blood cells -- -- 107 / 846268 -- -- -- 107 / 846268 --
whole body -- -- -- -- -- -- -- --