Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.485360Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 74 / 3316537 72 / 2498449 668 / 114162531 428 / 109592465 74 / 3316537 72 / 2498449 668 / 114162531 428 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   3 / 57865 -- 1 / 83577 0 / 16077 3 / 57865 -- 1 / 83577
bone marrow   19 / 29891   6 / 4978364 0 / 14774 19 / 29891 0 / 5047110 6 / 4978364
brain 13 / 506301 2 / 200215 12 / 729526 50 / 4997811 13 / 506301 2 / 200215 12 / 729526 50 / 4997811
cartilage   3 / 37226 -- 2 / 778035 0 / 15965 3 / 37226 -- 2 / 778035
cerebellum 2 / 90353   3 / 90885   2 / 90353 0 / 0 3 / 90885 0 / 1495938
cerebrum 6 / 198932   -- -- 6 / 198932 0 / 3422 -- --
cervix 1 / 3888 1 / 44577 -- -- 1 / 3888 1 / 44577 -- --
colon   2 / 151167 1 / 98089 3 / 643586 0 / 26551 2 / 151167 1 / 98089 3 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue     -- -- 0 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 9 / 128826 2 / 46440   4 / 12434232 9 / 128826 2 / 46440 0 / 85898 4 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 1 / 106627 2 / 89898 2 / 155372   1 / 106627 2 / 89898 2 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver       1 / 214987 0 / 96846 0 / 107249 0 / 66308 1 / 214987
lung 3 / 128150 5 / 170663 3 / 159917 3 / 159059 3 / 128150 5 / 170663 3 / 159917 3 / 159059
lymph node 9 / 62650 3 / 27007 193 / 5278419 7 / 4863489 9 / 62650 3 / 27007 193 / 5278419 7 / 4863489
lymphoreticular 1 / 17836 12 / 44303 -- -- 1 / 17836 12 / 44303 -- --
mammary gland   1 / 104307 201 / 43166038 111 / 30312656 0 / 46553 1 / 104307 201 / 43166038 111 / 30312656
muscle     2 / 107836   0 / 74039 0 / 27691 2 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary       2 / 179472 0 / 11462 0 / 89988 0 / 94887 2 / 179472
pancreas 1 / 7237 4 / 74930   4 / 189999 1 / 7237 4 / 74930 0 / 85728 4 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 9 / 241088   2 / 207348 -- 9 / 241088 0 / 39531 2 / 207348 --
pooled tissue 3 / 276455   -- -- 3 / 276455 0 / 0 -- --
prostate 1 / 79993   3 / 266949 4 / 491794 1 / 79993 0 / 107080 3 / 266949 4 / 491794
retina 2 / 29438 -- 6 / 820326 1 / 88490 2 / 29438 -- 6 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin     94 / 26905847 213 / 34522313 0 / 73633 0 / 125377 94 / 26905847 213 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 1 / 6230144 -- -- -- 1 / 6230144 --
stomach 2 / 26641 1 / 65644   7 / 448716 2 / 26641 1 / 65644 0 / 124767 7 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis     -- 9 / 12372003 0 / 143630 0 / 100058 -- 9 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid         0 / 11737 0 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 3 / 207932 12 / 479819     3 / 207932 12 / 479819 0 / 21833 0 / 51729
uterus     70 / 10193077 -- 0 / 38063 0 / 133582 70 / 10193077 --
vascular   -- 22 / 13135050 -- 0 / 46250 -- 22 / 13135050 --
white blood cells -- -- 53 / 846268 -- -- -- 53 / 846268 --
whole body -- -- -- -- -- -- -- --