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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.485070Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 156 / 3316537 179 / 2498449 955 / 114162531 743 / 109592465 156 / 3316537 179 / 2498449 955 / 114162531 743 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   8 / 57865 -- 3 / 83577 0 / 16077 8 / 57865 -- 3 / 83577
bone marrow     4 / 5047110 2 / 4978364 0 / 14774 0 / 29891 4 / 5047110 2 / 4978364
brain 20 / 506301 14 / 200215 12 / 729526 53 / 4997811 20 / 506301 14 / 200215 12 / 729526 53 / 4997811
cartilage   2 / 37226 -- 2 / 778035 0 / 15965 2 / 37226 -- 2 / 778035
cerebellum 5 / 90353   1 / 90885 14 / 1495938 5 / 90353 0 / 0 1 / 90885 14 / 1495938
cerebrum 7 / 198932   -- -- 7 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon 1 / 26551 8 / 151167 1 / 98089 25 / 643586 1 / 26551 8 / 151167 1 / 98089 25 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 24 / 246043   -- -- 24 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 8 / 128826 4 / 46440   221 / 12434232 8 / 128826 4 / 46440 0 / 85898 221 / 12434232
gastrointestinal tract 5 / 28803 1 / 12721   -- 5 / 28803 1 / 12721 0 / 45908 --
heart 3 / 76442     -- 3 / 76442 0 / 1 0 / 83063 --
kidney 7 / 106627 2 / 89898 5 / 155372 2 / 100281 7 / 106627 2 / 89898 5 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver   4 / 107249 1 / 66308 2 / 214987 0 / 96846 4 / 107249 1 / 66308 2 / 214987
lung 6 / 128150 9 / 170663 7 / 159917 4 / 159059 6 / 128150 9 / 170663 7 / 159917 4 / 159059
lymph node 7 / 62650   22 / 5278419 5 / 4863489 7 / 62650 0 / 27007 22 / 5278419 5 / 4863489
lymphoreticular 1 / 17836 8 / 44303 -- -- 1 / 17836 8 / 44303 -- --
mammary gland   3 / 104307 469 / 43166038 201 / 30312656 0 / 46553 3 / 104307 469 / 43166038 201 / 30312656
muscle 2 / 74039 3 / 27691 2 / 107836 1 / 61270 2 / 74039 3 / 27691 2 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 2 / 11462 11 / 89988 3 / 94887 1 / 179472 2 / 11462 11 / 89988 3 / 94887 1 / 179472
pancreas   2 / 74930 5 / 85728 5 / 189999 0 / 7237 2 / 74930 5 / 85728 5 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 9 / 241088 8 / 39531   -- 9 / 241088 8 / 39531 0 / 207348 --
pooled tissue 13 / 276455   -- -- 13 / 276455 0 / 0 -- --
prostate 6 / 79993 7 / 107080 2 / 266949 7 / 491794 6 / 79993 7 / 107080 2 / 266949 7 / 491794
retina 1 / 29438 -- 4 / 820326 2 / 88490 1 / 29438 -- 4 / 820326 2 / 88490
salivary gland   4 / 10368 -- -- 0 / 2490 4 / 10368 -- --
skin 2 / 73633 31 / 125377 96 / 26905847 121 / 34522313 2 / 73633 31 / 125377 96 / 26905847 121 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 85 / 6230144 -- -- -- 85 / 6230144 --
stomach   2 / 65644 1 / 124767   0 / 26641 2 / 65644 1 / 124767 0 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 10 / 143630 1 / 100058 -- 71 / 12372003 10 / 143630 1 / 100058 -- 71 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid         0 / 11737 0 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 6 / 207932 31 / 479819 1 / 21833 1 / 51729 6 / 207932 31 / 479819 1 / 21833 1 / 51729
uterus 2 / 38063 11 / 133582 105 / 10193077 -- 2 / 38063 11 / 133582 105 / 10193077 --
vascular 1 / 46250 -- 104 / 13135050 -- 1 / 46250 -- 104 / 13135050 --
white blood cells -- -- 25 / 846268 -- -- -- 25 / 846268 --
whole body -- -- -- -- -- -- -- --