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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.484047Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 97 / 3316537 86 / 2498449 7265 / 114162531 6347 / 109592465 97 / 3316537 86 / 2498449 7265 / 114162531 6347 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   2 / 57865 -- 10 / 83577 0 / 16077 2 / 57865 -- 10 / 83577
bone marrow     30 / 5047110 64 / 4978364 0 / 14774 0 / 29891 30 / 5047110 64 / 4978364
brain 22 / 506301 8 / 200215 33 / 729526 328 / 4997811 22 / 506301 8 / 200215 33 / 729526 328 / 4997811
cartilage   3 / 37226 -- 50 / 778035 0 / 15965 3 / 37226 -- 50 / 778035
cerebellum 1 / 90353   6 / 90885 35 / 1495938 1 / 90353 0 / 0 6 / 90885 35 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix 1 / 3888 3 / 44577 -- -- 1 / 3888 3 / 44577 -- --
colon 1 / 26551 6 / 151167 18 / 98089 86 / 643586 1 / 26551 6 / 151167 18 / 98089 86 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 3 / 246043   -- -- 3 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 6 / 128826     841 / 12434232 6 / 128826 0 / 46440 0 / 85898 841 / 12434232
gastrointestinal tract   1 / 12721 1 / 45908 -- 0 / 28803 1 / 12721 1 / 45908 --
heart     4 / 83063 -- 0 / 76442 0 / 1 4 / 83063 --
kidney 8 / 106627 2 / 89898 5 / 155372 16 / 100281 8 / 106627 2 / 89898 5 / 155372 16 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 7 / 107249 1 / 66308 4 / 214987 1 / 96846 7 / 107249 1 / 66308 4 / 214987
lung 10 / 128150 5 / 170663 7 / 159917 14 / 159059 10 / 128150 5 / 170663 7 / 159917 14 / 159059
lymph node     114 / 5278419 6 / 4863489 0 / 62650 0 / 27007 114 / 5278419 6 / 4863489
lymphoreticular   6 / 44303 -- -- 0 / 17836 6 / 44303 -- --
mammary gland 1 / 46553 5 / 104307 3393 / 43166038 1684 / 30312656 1 / 46553 5 / 104307 3393 / 43166038 1684 / 30312656
muscle 3 / 74039   9 / 107836 6 / 61270 3 / 74039 0 / 27691 9 / 107836 6 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   10 / 89988 7 / 94887 30 / 179472 0 / 11462 10 / 89988 7 / 94887 30 / 179472
pancreas     8 / 85728 18 / 189999 0 / 7237 0 / 74930 8 / 85728 18 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 5 / 241088 3 / 39531 6 / 207348 -- 5 / 241088 3 / 39531 6 / 207348 --
pooled tissue 8 / 276455   -- -- 8 / 276455 0 / 0 -- --
prostate 7 / 79993 5 / 107080 7 / 266949 31 / 491794 7 / 79993 5 / 107080 7 / 266949 31 / 491794
retina 1 / 29438 -- 39 / 820326 8 / 88490 1 / 29438 -- 39 / 820326 8 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633 1 / 125377 1534 / 26905847 2655 / 34522313 1 / 73633 1 / 125377 1534 / 26905847 2655 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 206 / 6230144 -- -- -- 206 / 6230144 --
stomach   2 / 65644 6 / 124767 48 / 448716 0 / 26641 2 / 65644 6 / 124767 48 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 1 / 143630 4 / 100058 -- 400 / 12372003 1 / 143630 4 / 100058 -- 400 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid 2 / 11737 1 / 32606 6 / 115938 9 / 124664 2 / 11737 1 / 32606 6 / 115938 9 / 124664
uncharacterized tissue 4 / 207932 7 / 479819 4 / 21833 4 / 51729 4 / 207932 7 / 479819 4 / 21833 4 / 51729
uterus   3 / 133582 960 / 10193077 -- 0 / 38063 3 / 133582 960 / 10193077 --
vascular   -- 712 / 13135050 -- 0 / 46250 -- 712 / 13135050 --
white blood cells -- -- 149 / 846268 -- -- -- 149 / 846268 --
whole body -- -- -- -- -- -- -- --