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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.483444Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 329 / 3316537 164 / 2498449 22207 / 114162531 24597 / 109592465 329 / 3316537 164 / 2498449 22207 / 114162531 24597 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 2 / 57865 --   1 / 16077 2 / 57865 -- 0 / 83577
bone marrow     1 / 5047110   0 / 14774 0 / 29891 1 / 5047110 0 / 4978364
brain 18 / 506301 8 / 200215 79 / 729526 416 / 4997811 18 / 506301 8 / 200215 79 / 729526 416 / 4997811
cartilage   4 / 37226 -- 29 / 778035 0 / 15965 4 / 37226 -- 29 / 778035
cerebellum     1 / 90885 60 / 1495938 0 / 90353 0 / 0 1 / 90885 60 / 1495938
cerebrum 13 / 198932   -- -- 13 / 198932 0 / 3422 -- --
cervix 2 / 3888   -- -- 2 / 3888 0 / 44577 -- --
colon 5 / 26551 17 / 151167   2 / 643586 5 / 26551 17 / 151167 0 / 98089 2 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 26 / 246043   -- -- 26 / 246043 0 / 38 -- --
endocrine   2 / 2857 -- -- 0 / 19564 2 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 60 / 128826   5 / 85898 28 / 12434232 60 / 128826 0 / 46440 5 / 85898 28 / 12434232
gastrointestinal tract 4 / 28803   1 / 45908 -- 4 / 28803 0 / 12721 1 / 45908 --
heart 20 / 76442     -- 20 / 76442 0 / 1 0 / 83063 --
kidney 42 / 106627 15 / 89898 10 / 155372   42 / 106627 15 / 89898 10 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846   2 / 66308   2 / 96846 0 / 107249 2 / 66308 0 / 214987
lung 5 / 128150 9 / 170663 4 / 159917 6 / 159059 5 / 128150 9 / 170663 4 / 159917 6 / 159059
lymph node   1 / 27007 118 / 5278419 42 / 4863489 0 / 62650 1 / 27007 118 / 5278419 42 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 7 / 46553 7 / 104307 2691 / 43166038 5152 / 30312656 7 / 46553 7 / 104307 2691 / 43166038 5152 / 30312656
muscle 1 / 74039 1 / 27691 5 / 107836 1 / 61270 1 / 74039 1 / 27691 5 / 107836 1 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   2 / 89988   7 / 179472 0 / 11462 2 / 89988 0 / 94887 7 / 179472
pancreas   8 / 74930   12 / 189999 0 / 7237 8 / 74930 0 / 85728 12 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 5 / 14891   -- -- 5 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 4 / 13260   -- -- 4 / 13260 0 / 1358 -- --
placenta 37 / 241088 1 / 39531 47 / 207348 -- 37 / 241088 1 / 39531 47 / 207348 --
pooled tissue 21 / 276455   -- -- 21 / 276455 0 / 0 -- --
prostate 12 / 79993 17 / 107080 4 / 266949 12 / 491794 12 / 79993 17 / 107080 4 / 266949 12 / 491794
retina 4 / 29438 -- 51 / 820326   4 / 29438 -- 51 / 820326 0 / 88490
salivary gland 2 / 2490 1 / 10368 -- -- 2 / 2490 1 / 10368 -- --
skin 14 / 73633 11 / 125377 18929 / 26905847 18577 / 34522313 14 / 73633 11 / 125377 18929 / 26905847 18577 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 4 / 52939   -- -- 4 / 52939 0 / 5 -- --
stem cell -- -- 16 / 6230144 -- -- -- 16 / 6230144 --
stomach 4 / 26641 1 / 65644 21 / 124767 13 / 448716 4 / 26641 1 / 65644 21 / 124767 13 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 2 / 143630 1 / 100058 -- 240 / 12372003 2 / 143630 1 / 100058 -- 240 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 1 / 115938   0 / 11737 1 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 4 / 207932 42 / 479819     4 / 207932 42 / 479819 0 / 21833 0 / 51729
uterus 5 / 38063 12 / 133582 214 / 10193077 -- 5 / 38063 12 / 133582 214 / 10193077 --
vascular 3 / 46250 -- 7 / 13135050 -- 3 / 46250 -- 7 / 13135050 --
white blood cells -- --   -- -- -- 0 / 846268 --
whole body -- -- -- -- -- -- -- --