Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.482521Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 58 / 3316537 72 / 2498449 922 / 114162531 1245 / 109592465 58 / 3316537 72 / 2498449 922 / 114162531 1245 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 5 / 57865 --   2 / 16077 5 / 57865 -- 0 / 83577
bone marrow       16 / 4978364 0 / 14774 0 / 29891 0 / 5047110 16 / 4978364
brain 4 / 506301   7 / 729526 35 / 4997811 4 / 506301 0 / 200215 7 / 729526 35 / 4997811
cartilage   2 / 37226 -- 1 / 778035 0 / 15965 2 / 37226 -- 1 / 778035
cerebellum     7 / 90885 20 / 1495938 0 / 90353 0 / 0 7 / 90885 20 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 1 / 26551 1 / 151167 4 / 98089 1 / 643586 1 / 26551 1 / 151167 4 / 98089 1 / 643586
ear 2 / 16130 -- -- -- 2 / 16130 -- -- --
embryonic tissue     -- -- 0 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 3 / 128826   3 / 85898 58 / 12434232 3 / 128826 0 / 46440 3 / 85898 58 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart     1 / 83063 -- 0 / 76442 0 / 1 1 / 83063 --
kidney 7 / 106627 2 / 89898     7 / 106627 2 / 89898 0 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver   11 / 107249   1 / 214987 0 / 96846 11 / 107249 0 / 66308 1 / 214987
lung 6 / 128150 8 / 170663 1 / 159917 3 / 159059 6 / 128150 8 / 170663 1 / 159917 3 / 159059
lymph node       23 / 4863489 0 / 62650 0 / 27007 0 / 5278419 23 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 3 / 46553 1 / 104307 12 / 43166038 590 / 30312656 3 / 46553 1 / 104307 12 / 43166038 590 / 30312656
muscle         0 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   1 / 89988     0 / 11462 1 / 89988 0 / 94887 0 / 179472
pancreas   2 / 74930     0 / 7237 2 / 74930 0 / 85728 0 / 189999
pancreatic islet   3 / 30072 -- -- 0 / 96524 3 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta       -- 0 / 241088 0 / 39531 0 / 207348 --
pooled tissue 11 / 276455   -- -- 11 / 276455 0 / 0 -- --
prostate 1 / 79993   5 / 266949   1 / 79993 0 / 107080 5 / 266949 0 / 491794
retina   -- 3 / 820326   0 / 29438 -- 3 / 820326 0 / 88490
salivary gland 1 / 2490   -- -- 1 / 2490 0 / 10368 -- --
skin 2 / 73633 2 / 125377 181 / 26905847 447 / 34522313 2 / 73633 2 / 125377 181 / 26905847 447 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 6 / 6230144 -- -- -- 6 / 6230144 --
stomach   2 / 65644 3 / 124767 3 / 448716 0 / 26641 2 / 65644 3 / 124767 3 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis     -- 46 / 12372003 0 / 143630 0 / 100058 -- 46 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606 1 / 115938   0 / 11737 2 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 5 / 207932 22 / 479819   1 / 51729 5 / 207932 22 / 479819 0 / 21833 1 / 51729
uterus 1 / 38063 8 / 133582 125 / 10193077 -- 1 / 38063 8 / 133582 125 / 10193077 --
vascular 3 / 46250 -- 561 / 13135050 -- 3 / 46250 -- 561 / 13135050 --
white blood cells -- -- 2 / 846268 -- -- -- 2 / 846268 --
whole body -- -- -- -- -- -- -- --