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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.482390Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 169 / 3316537 59 / 2498449 3582 / 114162531 3148 / 109592465 169 / 3316537 59 / 2498449 3582 / 114162531 3148 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   4 / 57865 --   0 / 16077 4 / 57865 -- 0 / 83577
bone marrow 2 / 14774 1 / 29891 4 / 5047110 89 / 4978364 2 / 14774 1 / 29891 4 / 5047110 89 / 4978364
brain 15 / 506301 1 / 200215 13 / 729526 93 / 4997811 15 / 506301 1 / 200215 13 / 729526 93 / 4997811
cartilage 4 / 15965 5 / 37226 -- 15 / 778035 4 / 15965 5 / 37226 -- 15 / 778035
cerebellum     1 / 90885 16 / 1495938 0 / 90353 0 / 0 1 / 90885 16 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   2 / 151167 1 / 98089 8 / 643586 0 / 26551 2 / 151167 1 / 98089 8 / 643586
ear 6 / 16130 -- -- -- 6 / 16130 -- -- --
embryonic tissue 12 / 246043   -- -- 12 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 9 / 128826     971 / 12434232 9 / 128826 0 / 46440 0 / 85898 971 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 4 / 76442   1 / 83063 -- 4 / 76442 0 / 1 1 / 83063 --
kidney 10 / 106627 2 / 89898 11 / 155372   10 / 106627 2 / 89898 11 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 3 / 96846 5 / 107249 1 / 66308 2 / 214987 3 / 96846 5 / 107249 1 / 66308 2 / 214987
lung 9 / 128150 5 / 170663 2 / 159917 2 / 159059 9 / 128150 5 / 170663 2 / 159917 2 / 159059
lymph node     21 / 5278419 5 / 4863489 0 / 62650 0 / 27007 21 / 5278419 5 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 2 / 46553 1 / 104307 1370 / 43166038 781 / 30312656 2 / 46553 1 / 104307 1370 / 43166038 781 / 30312656
muscle 3 / 74039   1 / 107836 1 / 61270 3 / 74039 0 / 27691 1 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   4 / 89988   1 / 179472 0 / 11462 4 / 89988 0 / 94887 1 / 179472
pancreas   1 / 74930 2 / 85728 2 / 189999 0 / 7237 1 / 74930 2 / 85728 2 / 189999
pancreatic islet 6 / 96524   -- -- 6 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 30 / 241088   9 / 207348 -- 30 / 241088 0 / 39531 9 / 207348 --
pooled tissue 16 / 276455   -- -- 16 / 276455 0 / 0 -- --
prostate 3 / 79993 2 / 107080 12 / 266949 7 / 491794 3 / 79993 2 / 107080 12 / 266949 7 / 491794
retina 1 / 29438 -- 4 / 820326 3 / 88490 1 / 29438 -- 4 / 820326 3 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 7 / 73633   855 / 26905847 980 / 34522313 7 / 73633 0 / 125377 855 / 26905847 980 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 80 / 6230144 -- -- -- 80 / 6230144 --
stomach 2 / 26641 5 / 65644 2 / 124767 4 / 448716 2 / 26641 5 / 65644 2 / 124767 4 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 6 / 143630 3 / 100058 -- 167 / 12372003 6 / 143630 3 / 100058 -- 167 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     1 / 115938   0 / 11737 0 / 32606 1 / 115938 0 / 124664
uncharacterized tissue   13 / 479819   1 / 51729 0 / 207932 13 / 479819 0 / 21833 1 / 51729
uterus 5 / 38063 3 / 133582 891 / 10193077 -- 5 / 38063 3 / 133582 891 / 10193077 --
vascular   -- 292 / 13135050 -- 0 / 46250 -- 292 / 13135050 --
white blood cells -- -- 8 / 846268 -- -- -- 8 / 846268 --
whole body -- -- -- -- -- -- -- --