Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.482144Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 234 / 3316537 225 / 2498449 138384 / 114162531 147777 / 109592465 234 / 3316537 225 / 2498449 138384 / 114162531 147777 / 109592465
adrenal cortex -- 2 / 9928 -- -- -- 2 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   17 / 57865 -- 138 / 83577 0 / 16077 17 / 57865 -- 138 / 83577
bone marrow 1 / 14774 1 / 29891 17969 / 5047110 17036 / 4978364 1 / 14774 1 / 29891 17969 / 5047110 17036 / 4978364
brain 7 / 506301 3 / 200215 319 / 729526 2641 / 4997811 7 / 506301 3 / 200215 319 / 729526 2641 / 4997811
cartilage   1 / 37226 -- 520 / 778035 0 / 15965 1 / 37226 -- 520 / 778035
cerebellum     22 / 90885 1073 / 1495938 0 / 90353 0 / 0 22 / 90885 1073 / 1495938
cerebrum 1 / 198932   -- -- 1 / 198932 0 / 3422 -- --
cervix   5 / 44577 -- -- 0 / 3888 5 / 44577 -- --
colon   18 / 151167 27 / 98089 287 / 643586 0 / 26551 18 / 151167 27 / 98089 287 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 51 / 246043   -- -- 51 / 246043 0 / 38 -- --
endocrine 3 / 19564 1 / 2857 -- -- 3 / 19564 1 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 8 / 128826 4 / 46440 46 / 85898 30413 / 12434232 8 / 128826 4 / 46440 46 / 85898 30413 / 12434232
gastrointestinal tract 7 / 28803 1 / 12721 15 / 45908 -- 7 / 28803 1 / 12721 15 / 45908 --
heart 11 / 76442   24 / 83063 -- 11 / 76442 0 / 1 24 / 83063 --
kidney 2 / 106627 9 / 89898 150 / 155372 46 / 100281 2 / 106627 9 / 89898 150 / 155372 46 / 100281
limb -- -- -- -- -- -- -- --
liver 7 / 96846 3 / 107249 13 / 66308 80 / 214987 7 / 96846 3 / 107249 13 / 66308 80 / 214987
lung 6 / 128150 11 / 170663 164 / 159917 163 / 159059 6 / 128150 11 / 170663 164 / 159917 163 / 159059
lymph node 4 / 62650 7 / 27007 11739 / 5278419 15431 / 4863489 4 / 62650 7 / 27007 11739 / 5278419 15431 / 4863489
lymphoreticular 4 / 17836 2 / 44303 -- -- 4 / 17836 2 / 44303 -- --
mammary gland 2 / 46553 10 / 104307 14580 / 43166038 27851 / 30312656 2 / 46553 10 / 104307 14580 / 43166038 27851 / 30312656
muscle 27 / 74039 8 / 27691 50 / 107836 30 / 61270 27 / 74039 8 / 27691 50 / 107836 30 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 2 / 11462 8 / 89988 109 / 94887 121 / 179472 2 / 11462 8 / 89988 109 / 94887 121 / 179472
pancreas 4 / 7237 8 / 74930 70 / 85728 144 / 189999 4 / 7237 8 / 74930 70 / 85728 144 / 189999
pancreatic islet 7 / 96524 6 / 30072 -- -- 7 / 96524 6 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 7 / 241088 7 / 39531 48 / 207348 -- 7 / 241088 7 / 39531 48 / 207348 --
pooled tissue 8 / 276455   -- -- 8 / 276455 0 / 0 -- --
prostate 9 / 79993 31 / 107080 391 / 266949 774 / 491794 9 / 79993 31 / 107080 391 / 266949 774 / 491794
retina 1 / 29438 -- 102 / 820326 9 / 88490 1 / 29438 -- 102 / 820326 9 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 6 / 73633 10 / 125377 25825 / 26905847 30793 / 34522313 6 / 73633 10 / 125377 25825 / 26905847 30793 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 17120 / 6230144 -- -- -- 17120 / 6230144 --
stomach 3 / 26641 6 / 65644 61 / 124767 212 / 448716 3 / 26641 6 / 65644 61 / 124767 212 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis   4 / 100058 -- 19916 / 12372003 0 / 143630 4 / 100058 -- 19916 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 2 / 11737 3 / 32606 58 / 115938 74 / 124664 2 / 11737 3 / 32606 58 / 115938 74 / 124664
uncharacterized tissue 27 / 207932 22 / 479819 59 / 21833 25 / 51729 27 / 207932 22 / 479819 59 / 21833 25 / 51729
uterus 2 / 38063 12 / 133582 16621 / 10193077 -- 2 / 38063 12 / 133582 16621 / 10193077 --
vascular 6 / 46250 -- 32348 / 13135050 -- 6 / 46250 -- 32348 / 13135050 --
white blood cells -- -- 454 / 846268 -- -- -- 454 / 846268 --
whole body -- -- -- -- -- -- -- --