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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.479396Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 394 / 3316537 248 / 2498449 646 / 114162531 1024 / 109592465 394 / 3316537 248 / 2498449 646 / 114162531 1024 / 109592465
adrenal cortex -- 2 / 9928 -- -- -- 2 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 7 / 57865 -- 1 / 83577 2 / 16077 7 / 57865 -- 1 / 83577
bone marrow 1 / 14774 6 / 29891 63 / 5047110 174 / 4978364 1 / 14774 6 / 29891 63 / 5047110 174 / 4978364
brain 54 / 506301 21 / 200215 8 / 729526 44 / 4997811 54 / 506301 21 / 200215 8 / 729526 44 / 4997811
cartilage 1 / 15965 10 / 37226 -- 21 / 778035 1 / 15965 10 / 37226 -- 21 / 778035
cerebellum 11 / 90353     11 / 1495938 11 / 90353 0 / 0 0 / 90885 11 / 1495938
cerebrum 16 / 198932   -- -- 16 / 198932 0 / 3422 -- --
cervix   8 / 44577 -- -- 0 / 3888 8 / 44577 -- --
colon 1 / 26551 10 / 151167   5 / 643586 1 / 26551 10 / 151167 0 / 98089 5 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 39 / 246043   -- -- 39 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 11 / 128826 9 / 46440 1 / 85898 93 / 12434232 11 / 128826 9 / 46440 1 / 85898 93 / 12434232
gastrointestinal tract 1 / 28803 3 / 12721   -- 1 / 28803 3 / 12721 0 / 45908 --
heart 6 / 76442     -- 6 / 76442 0 / 1 0 / 83063 --
kidney 10 / 106627 3 / 89898 1 / 155372   10 / 106627 3 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 17 / 96846 12 / 107249     17 / 96846 12 / 107249 0 / 66308 0 / 214987
lung 22 / 128150 15 / 170663   4 / 159059 22 / 128150 15 / 170663 0 / 159917 4 / 159059
lymph node 10 / 62650 1 / 27007 23 / 5278419 4 / 4863489 10 / 62650 1 / 27007 23 / 5278419 4 / 4863489
lymphoreticular   8 / 44303 -- -- 0 / 17836 8 / 44303 -- --
mammary gland 4 / 46553 8 / 104307 281 / 43166038 434 / 30312656 4 / 46553 8 / 104307 281 / 43166038 434 / 30312656
muscle 11 / 74039 5 / 27691   1 / 61270 11 / 74039 5 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 3 / 11462 2 / 89988   5 / 179472 3 / 11462 2 / 89988 0 / 94887 5 / 179472
pancreas   2 / 74930   1 / 189999 0 / 7237 2 / 74930 0 / 85728 1 / 189999
pancreatic islet 7 / 96524   -- -- 7 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system 3 / 14891   -- -- 3 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 3 / 13260   -- -- 3 / 13260 0 / 1358 -- --
placenta 31 / 241088 10 / 39531   -- 31 / 241088 10 / 39531 0 / 207348 --
pooled tissue 29 / 276455   -- -- 29 / 276455 0 / 0 -- --
prostate 9 / 79993 9 / 107080   10 / 491794 9 / 79993 9 / 107080 0 / 266949 10 / 491794
retina 6 / 29438 -- 3 / 820326   6 / 29438 -- 3 / 820326 0 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin 6 / 73633 12 / 125377 73 / 26905847 66 / 34522313 6 / 73633 12 / 125377 73 / 26905847 66 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 10 / 52939   -- -- 10 / 52939 0 / 5 -- --
stem cell -- -- 102 / 6230144 -- -- -- 102 / 6230144 --
stomach 3 / 26641 5 / 65644   1 / 448716 3 / 26641 5 / 65644 0 / 124767 1 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 18 / 143630 21 / 100058 -- 145 / 12372003 18 / 143630 21 / 100058 -- 145 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737 1 / 32606     1 / 11737 1 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 33 / 207932 42 / 479819   4 / 51729 33 / 207932 42 / 479819 0 / 21833 4 / 51729
uterus 3 / 38063 13 / 133582 23 / 10193077 -- 3 / 38063 13 / 133582 23 / 10193077 --
vascular 4 / 46250 -- 54 / 13135050 -- 4 / 46250 -- 54 / 13135050 --
white blood cells -- -- 14 / 846268 -- -- -- 14 / 846268 --
whole body -- -- -- -- -- -- -- --