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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.478588Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 188 / 3316537 115 / 2498449 3753 / 114162531 3174 / 109592465 188 / 3316537 115 / 2498449 3753 / 114162531 3174 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077   --   1 / 16077 0 / 57865 -- 0 / 83577
bone marrow     5 / 5047110 5 / 4978364 0 / 14774 0 / 29891 5 / 5047110 5 / 4978364
brain 25 / 506301 28 / 200215 22 / 729526 271 / 4997811 25 / 506301 28 / 200215 22 / 729526 271 / 4997811
cartilage 4 / 15965   -- 12 / 778035 4 / 15965 0 / 37226 -- 12 / 778035
cerebellum 18 / 90353   11 / 90885 14 / 1495938 18 / 90353 0 / 0 11 / 90885 14 / 1495938
cerebrum 9 / 198932   -- -- 9 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   2 / 151167   4 / 643586 0 / 26551 2 / 151167 0 / 98089 4 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 5 / 246043   -- -- 5 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 7 / 128826     63 / 12434232 7 / 128826 0 / 46440 0 / 85898 63 / 12434232
gastrointestinal tract   1 / 12721   -- 0 / 28803 1 / 12721 0 / 45908 --
heart 6 / 76442   2 / 83063 -- 6 / 76442 0 / 1 2 / 83063 --
kidney 1 / 106627 1 / 89898 1 / 155372 2 / 100281 1 / 106627 1 / 89898 1 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 4 / 107249 2 / 66308 5 / 214987 1 / 96846 4 / 107249 2 / 66308 5 / 214987
lung 6 / 128150 9 / 170663 5 / 159917 4 / 159059 6 / 128150 9 / 170663 5 / 159917 4 / 159059
lymph node 14 / 62650   1193 / 5278419 138 / 4863489 14 / 62650 0 / 27007 1193 / 5278419 138 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 9 / 46553 2 / 104307 1236 / 43166038 2144 / 30312656 9 / 46553 2 / 104307 1236 / 43166038 2144 / 30312656
muscle 2 / 74039   5 / 107836   2 / 74039 0 / 27691 5 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   7 / 89988 3 / 94887 11 / 179472 0 / 11462 7 / 89988 3 / 94887 11 / 179472
pancreas   9 / 74930   1 / 189999 0 / 7237 9 / 74930 0 / 85728 1 / 189999
pancreatic islet 2 / 96524   -- -- 2 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 4 / 14891   -- -- 4 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 3 / 13260   -- -- 3 / 13260 0 / 1358 -- --
placenta 6 / 241088   4 / 207348 -- 6 / 241088 0 / 39531 4 / 207348 --
pooled tissue 20 / 276455   -- -- 20 / 276455 0 / 0 -- --
prostate 11 / 79993     3 / 491794 11 / 79993 0 / 107080 0 / 266949 3 / 491794
retina 1 / 29438 -- 18 / 820326   1 / 29438 -- 18 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 2 / 73633   753 / 26905847 457 / 34522313 2 / 73633 0 / 125377 753 / 26905847 457 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 13 / 6230144 -- -- -- 13 / 6230144 --
stomach 1 / 26641 4 / 65644 1 / 124767 7 / 448716 1 / 26641 4 / 65644 1 / 124767 7 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 7 / 143630 1 / 100058 -- 31 / 12372003 7 / 143630 1 / 100058 -- 31 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     3 / 115938 1 / 124664 0 / 11737 0 / 32606 3 / 115938 1 / 124664
uncharacterized tissue 6 / 207932 35 / 479819   1 / 51729 6 / 207932 35 / 479819 0 / 21833 1 / 51729
uterus 9 / 38063 8 / 133582 388 / 10193077 -- 9 / 38063 8 / 133582 388 / 10193077 --
vascular 1 / 46250 -- 57 / 13135050 -- 1 / 46250 -- 57 / 13135050 --
white blood cells -- -- 31 / 846268 -- -- -- 31 / 846268 --
whole body -- -- -- -- -- -- -- --