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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.478429Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 135 / 3316537 117 / 2498449 1322 / 114162531 1258 / 109592465 135 / 3316537 117 / 2498449 1322 / 114162531 1258 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 4 / 57865 --   2 / 16077 4 / 57865 -- 0 / 83577
bone marrow     9 / 5047110 39 / 4978364 0 / 14774 0 / 29891 9 / 5047110 39 / 4978364
brain 3 / 506301 2 / 200215 2 / 729526 41 / 4997811 3 / 506301 2 / 200215 2 / 729526 41 / 4997811
cartilage 1 / 15965 3 / 37226 -- 4 / 778035 1 / 15965 3 / 37226 -- 4 / 778035
cerebellum 1 / 90353     9 / 1495938 1 / 90353 0 / 0 0 / 90885 9 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon 1 / 26551 13 / 151167 2 / 98089 1 / 643586 1 / 26551 13 / 151167 2 / 98089 1 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 6 / 246043   -- -- 6 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 4 / 128826 2 / 46440   46 / 12434232 4 / 128826 2 / 46440 0 / 85898 46 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721   -- 1 / 28803 1 / 12721 0 / 45908 --
heart 3 / 76442     -- 3 / 76442 0 / 1 0 / 83063 --
kidney 5 / 106627 4 / 89898 1 / 155372   5 / 106627 4 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 7 / 96846 2 / 107249   3 / 214987 7 / 96846 2 / 107249 0 / 66308 3 / 214987
lung 2 / 128150 2 / 170663 2 / 159917 1 / 159059 2 / 128150 2 / 170663 2 / 159917 1 / 159059
lymph node 11 / 62650 4 / 27007 75 / 5278419 22 / 4863489 11 / 62650 4 / 27007 75 / 5278419 22 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland   9 / 104307 461 / 43166038 537 / 30312656 0 / 46553 9 / 104307 461 / 43166038 537 / 30312656
muscle 5 / 74039   1 / 107836   5 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous 2 / 10333   -- -- 2 / 10333 0 / 8 -- --
ovary 1 / 11462 1 / 89988   1 / 179472 1 / 11462 1 / 89988 0 / 94887 1 / 179472
pancreas   2 / 74930 2 / 85728 4 / 189999 0 / 7237 2 / 74930 2 / 85728 4 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 1 / 241088     -- 1 / 241088 0 / 39531 0 / 207348 --
pooled tissue 19 / 276455   -- -- 19 / 276455 0 / 0 -- --
prostate 5 / 79993 30 / 107080 1 / 266949 6 / 491794 5 / 79993 30 / 107080 1 / 266949 6 / 491794
retina 2 / 29438 -- 10 / 820326 1 / 88490 2 / 29438 -- 10 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 5 / 73633 3 / 125377 405 / 26905847 466 / 34522313 5 / 73633 3 / 125377 405 / 26905847 466 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 37 / 6230144 -- -- -- 37 / 6230144 --
stomach 1 / 26641 2 / 65644   13 / 448716 1 / 26641 2 / 65644 0 / 124767 13 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 9 / 143630 3 / 100058 -- 60 / 12372003 9 / 143630 3 / 100058 -- 60 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid   2 / 32606   3 / 124664 0 / 11737 2 / 32606 0 / 115938 3 / 124664
uncharacterized tissue 22 / 207932 24 / 479819   1 / 51729 22 / 207932 24 / 479819 0 / 21833 1 / 51729
uterus 1 / 38063 2 / 133582 116 / 10193077 -- 1 / 38063 2 / 133582 116 / 10193077 --
vascular 1 / 46250 -- 183 / 13135050 -- 1 / 46250 -- 183 / 13135050 --
white blood cells -- -- 15 / 846268 -- -- -- 15 / 846268 --
whole body -- -- -- -- -- -- -- --