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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.477879Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 281 / 3316537 378 / 2498449 1340 / 114162531 948 / 109592465 281 / 3316537 378 / 2498449 1340 / 114162531 948 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   13 / 57865 -- 1 / 83577 0 / 16077 13 / 57865 -- 1 / 83577
bone marrow     8 / 5047110 18 / 4978364 0 / 14774 0 / 29891 8 / 5047110 18 / 4978364
brain 17 / 506301 36 / 200215 17 / 729526 127 / 4997811 17 / 506301 36 / 200215 17 / 729526 127 / 4997811
cartilage   1 / 37226 -- 13 / 778035 0 / 15965 1 / 37226 -- 13 / 778035
cerebellum       18 / 1495938 0 / 90353 0 / 0 0 / 90885 18 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix 1 / 3888   -- -- 1 / 3888 0 / 44577 -- --
colon   33 / 151167 1 / 98089 64 / 643586 0 / 26551 33 / 151167 1 / 98089 64 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 41 / 246043   -- -- 41 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 17 / 128826 10 / 46440 4 / 85898   17 / 128826 10 / 46440 4 / 85898 0 / 12434232
gastrointestinal tract   2 / 12721   -- 0 / 28803 2 / 12721 0 / 45908 --
heart 17 / 76442     -- 17 / 76442 0 / 1 0 / 83063 --
kidney 3 / 106627 10 / 89898 10 / 155372 6 / 100281 3 / 106627 10 / 89898 10 / 155372 6 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 3 / 107249   4 / 214987 1 / 96846 3 / 107249 0 / 66308 4 / 214987
lung 12 / 128150 32 / 170663 5 / 159917   12 / 128150 32 / 170663 5 / 159917 0 / 159059
lymph node 76 / 62650 28 / 27007 43 / 5278419 10 / 4863489 76 / 62650 28 / 27007 43 / 5278419 10 / 4863489
lymphoreticular 4 / 17836 5 / 44303 -- -- 4 / 17836 5 / 44303 -- --
mammary gland   7 / 104307 860 / 43166038 228 / 30312656 0 / 46553 7 / 104307 860 / 43166038 228 / 30312656
muscle   7 / 27691   1 / 61270 0 / 74039 7 / 27691 0 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 44 / 89988 14 / 94887 11 / 179472 1 / 11462 44 / 89988 14 / 94887 11 / 179472
pancreas   25 / 74930 5 / 85728 9 / 189999 0 / 7237 25 / 74930 5 / 85728 9 / 189999
pancreatic islet 6 / 96524   -- -- 6 / 96524 0 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 9 / 241088 15 / 39531 1 / 207348 -- 9 / 241088 15 / 39531 1 / 207348 --
pooled tissue 50 / 276455   -- -- 50 / 276455 0 / 0 -- --
prostate 2 / 79993 11 / 107080 13 / 266949 49 / 491794 2 / 79993 11 / 107080 13 / 266949 49 / 491794
retina 4 / 29438 -- 15 / 820326   4 / 29438 -- 15 / 820326 0 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin 3 / 73633 27 / 125377 20 / 26905847 61 / 34522313 3 / 73633 27 / 125377 20 / 26905847 61 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 160 / 6230144 -- -- -- 160 / 6230144 --
stomach   6 / 65644 1 / 124767 8 / 448716 0 / 26641 6 / 65644 1 / 124767 8 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 3 / 100058 -- 319 / 12372003 3 / 143630 3 / 100058 -- 319 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737   2 / 115938 1 / 124664 1 / 11737 0 / 32606 2 / 115938 1 / 124664
uncharacterized tissue 8 / 207932 42 / 479819 1 / 21833   8 / 207932 42 / 479819 1 / 21833 0 / 51729
uterus 2 / 38063 14 / 133582 91 / 10193077 -- 2 / 38063 14 / 133582 91 / 10193077 --
vascular 2 / 46250 -- 60 / 13135050 -- 2 / 46250 -- 60 / 13135050 --
white blood cells -- -- 9 / 846268 -- -- -- 9 / 846268 --
whole body -- -- -- -- -- -- -- --