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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.477015Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 178 / 3316537 46 / 2498449 1746 / 114162531 2389 / 109592465 178 / 3316537 46 / 2498449 1746 / 114162531 2389 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 5 / 16077 3 / 57865 -- 1 / 83577 5 / 16077 3 / 57865 -- 1 / 83577
bone marrow     17 / 5047110 2 / 4978364 0 / 14774 0 / 29891 17 / 5047110 2 / 4978364
brain 6 / 506301 5 / 200215 6 / 729526 100 / 4997811 6 / 506301 5 / 200215 6 / 729526 100 / 4997811
cartilage 9 / 15965 8 / 37226 -- 9 / 778035 9 / 15965 8 / 37226 -- 9 / 778035
cerebellum       2 / 1495938 0 / 90353 0 / 0 0 / 90885 2 / 1495938
cerebrum 3 / 198932   -- -- 3 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   1 / 151167     0 / 26551 1 / 151167 0 / 98089 0 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 5 / 246043   -- -- 5 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 11 / 128826   3 / 85898 2 / 12434232 11 / 128826 0 / 46440 3 / 85898 2 / 12434232
gastrointestinal tract 2 / 28803     -- 2 / 28803 0 / 12721 0 / 45908 --
heart 11 / 76442     -- 11 / 76442 0 / 1 0 / 83063 --
kidney 4 / 106627 3 / 89898     4 / 106627 3 / 89898 0 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846   1 / 66308 3 / 214987 2 / 96846 0 / 107249 1 / 66308 3 / 214987
lung 5 / 128150   9 / 159917   5 / 128150 0 / 170663 9 / 159917 0 / 159059
lymph node   1 / 27007 105 / 5278419 4 / 4863489 0 / 62650 1 / 27007 105 / 5278419 4 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 1 / 46553 3 / 104307 180 / 43166038 534 / 30312656 1 / 46553 3 / 104307 180 / 43166038 534 / 30312656
muscle 10 / 74039   1 / 107836   10 / 74039 0 / 27691 1 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     1 / 94887   0 / 11462 0 / 89988 1 / 94887 0 / 179472
pancreas   3 / 74930     0 / 7237 3 / 74930 0 / 85728 0 / 189999
pancreatic islet 1 / 96524   -- -- 1 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 16 / 241088   8 / 207348 -- 16 / 241088 0 / 39531 8 / 207348 --
pooled tissue 19 / 276455   -- -- 19 / 276455 0 / 0 -- --
prostate 4 / 79993 1 / 107080 1 / 266949 1 / 491794 4 / 79993 1 / 107080 1 / 266949 1 / 491794
retina 2 / 29438 -- 17 / 820326   2 / 29438 -- 17 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 2 / 73633 1 / 125377 441 / 26905847 1724 / 34522313 2 / 73633 1 / 125377 441 / 26905847 1724 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- --   -- -- -- 0 / 6230144 --
stomach   3 / 65644 2 / 124767 1 / 448716 0 / 26641 3 / 65644 2 / 124767 1 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630 2 / 100058 -- 5 / 12372003 4 / 143630 2 / 100058 -- 5 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 25 / 11737 3 / 32606 9 / 115938 1 / 124664 25 / 11737 3 / 32606 9 / 115938 1 / 124664
uncharacterized tissue 10 / 207932 8 / 479819     10 / 207932 8 / 479819 0 / 21833 0 / 51729
uterus 1 / 38063 1 / 133582 689 / 10193077 -- 1 / 38063 1 / 133582 689 / 10193077 --
vascular 16 / 46250 -- 256 / 13135050 -- 16 / 46250 -- 256 / 13135050 --
white blood cells -- --   -- -- -- 0 / 846268 --
whole body -- -- -- -- -- -- -- --