Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.475733Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 424 / 3316537 373 / 2498449 14148 / 114162531 21665 / 109592465 424 / 3316537 373 / 2498449 14148 / 114162531 21665 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   6 / 57865 --   0 / 16077 6 / 57865 -- 0 / 83577
bone marrow 2 / 14774 12 / 29891 116 / 5047110 157 / 4978364 2 / 14774 12 / 29891 116 / 5047110 157 / 4978364
brain 99 / 506301 11 / 200215 109 / 729526 547 / 4997811 99 / 506301 11 / 200215 109 / 729526 547 / 4997811
cartilage 1 / 15965 4 / 37226 -- 9 / 778035 1 / 15965 4 / 37226 -- 9 / 778035
cerebellum 10 / 90353   15 / 90885 322 / 1495938 10 / 90353 0 / 0 15 / 90885 322 / 1495938
cerebrum 19 / 198932   -- -- 19 / 198932 0 / 3422 -- --
cervix   2 / 44577 -- -- 0 / 3888 2 / 44577 -- --
colon 5 / 26551 26 / 151167   24 / 643586 5 / 26551 26 / 151167 0 / 98089 24 / 643586
ear 1 / 16130 -- -- -- 1 / 16130 -- -- --
embryonic tissue 55 / 246043   -- -- 55 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 12 / 128826 4 / 46440 10 / 85898 9483 / 12434232 12 / 128826 4 / 46440 10 / 85898 9483 / 12434232
gastrointestinal tract 9 / 28803 3 / 12721 2 / 45908 -- 9 / 28803 3 / 12721 2 / 45908 --
heart 21 / 76442   8 / 83063 -- 21 / 76442 0 / 1 8 / 83063 --
kidney 10 / 106627 6 / 89898 12 / 155372   10 / 106627 6 / 89898 12 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 9 / 96846 11 / 107249 6 / 66308 4 / 214987 9 / 96846 11 / 107249 6 / 66308 4 / 214987
lung 22 / 128150 14 / 170663 14 / 159917 1 / 159059 22 / 128150 14 / 170663 14 / 159917 1 / 159059
lymph node 4 / 62650 12 / 27007 763 / 5278419 207 / 4863489 4 / 62650 12 / 27007 763 / 5278419 207 / 4863489
lymphoreticular 1 / 17836 4 / 44303 -- -- 1 / 17836 4 / 44303 -- --
mammary gland 9 / 46553 6 / 104307 408 / 43166038 3434 / 30312656 9 / 46553 6 / 104307 408 / 43166038 3434 / 30312656
muscle 4 / 74039 1 / 27691 1 / 107836 4 / 61270 4 / 74039 1 / 27691 1 / 107836 4 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   3 / 89988 2 / 94887 5 / 179472 0 / 11462 3 / 89988 2 / 94887 5 / 179472
pancreas   2 / 74930   4 / 189999 0 / 7237 2 / 74930 0 / 85728 4 / 189999
pancreatic islet 13 / 96524   -- -- 13 / 96524 0 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 24 / 241088 7 / 39531 18 / 207348 -- 24 / 241088 7 / 39531 18 / 207348 --
pooled tissue 14 / 276455   -- -- 14 / 276455 0 / 0 -- --
prostate 5 / 79993 38 / 107080 5 / 266949 6 / 491794 5 / 79993 38 / 107080 5 / 266949 6 / 491794
retina 8 / 29438 -- 126 / 820326 34 / 88490 8 / 29438 -- 126 / 820326 34 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 11 / 125377 5796 / 26905847 5796 / 34522313 4 / 73633 11 / 125377 5796 / 26905847 5796 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 5 / 52939   -- -- 5 / 52939 0 / 5 -- --
stem cell -- -- 2092 / 6230144 -- -- -- 2092 / 6230144 --
stomach 5 / 26641 9 / 65644 13 / 124767 30 / 448716 5 / 26641 9 / 65644 13 / 124767 30 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 39 / 100058 -- 1583 / 12372003 3 / 143630 39 / 100058 -- 1583 / 12372003
thymus 2 / 4478   -- -- 2 / 4478 0 / 165 -- --
thyroid 3 / 11737 8 / 32606 14 / 115938 8 / 124664 3 / 11737 8 / 32606 14 / 115938 8 / 124664
uncharacterized tissue 24 / 207932 102 / 479819 3 / 21833 7 / 51729 24 / 207932 102 / 479819 3 / 21833 7 / 51729
uterus 10 / 38063 26 / 133582 1175 / 10193077 -- 10 / 38063 26 / 133582 1175 / 10193077 --
vascular 6 / 46250 -- 3394 / 13135050 -- 6 / 46250 -- 3394 / 13135050 --
white blood cells -- -- 46 / 846268 -- -- -- 46 / 846268 --
whole body -- -- -- -- -- -- -- --