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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.475353Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 217 / 3316537 96 / 2498449 7283 / 114162531 15609 / 109592465 217 / 3316537 96 / 2498449 7283 / 114162531 15609 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 5 / 57865 --   2 / 16077 5 / 57865 -- 0 / 83577
bone marrow     119 / 5047110 116 / 4978364 0 / 14774 0 / 29891 119 / 5047110 116 / 4978364
brain 9 / 506301 10 / 200215 44 / 729526 196 / 4997811 9 / 506301 10 / 200215 44 / 729526 196 / 4997811
cartilage   3 / 37226 -- 6 / 778035 0 / 15965 3 / 37226 -- 6 / 778035
cerebellum 1 / 90353   12 / 90885 175 / 1495938 1 / 90353 0 / 0 12 / 90885 175 / 1495938
cerebrum 5 / 198932   -- -- 5 / 198932 0 / 3422 -- --
cervix 1 / 3888   -- -- 1 / 3888 0 / 44577 -- --
colon   7 / 151167 1 / 98089 12 / 643586 0 / 26551 7 / 151167 1 / 98089 12 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 13 / 246043   -- -- 13 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 7 / 128826 2 / 46440 2 / 85898 971 / 12434232 7 / 128826 2 / 46440 2 / 85898 971 / 12434232
gastrointestinal tract     5 / 45908 -- 0 / 28803 0 / 12721 5 / 45908 --
heart 17 / 76442   6 / 83063 -- 17 / 76442 0 / 1 6 / 83063 --
kidney 4 / 106627 4 / 89898 7 / 155372 1 / 100281 4 / 106627 4 / 89898 7 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver   2 / 107249 32 / 66308 15 / 214987 0 / 96846 2 / 107249 32 / 66308 15 / 214987
lung 23 / 128150 15 / 170663 10 / 159917 4 / 159059 23 / 128150 15 / 170663 10 / 159917 4 / 159059
lymph node 11 / 62650   687 / 5278419 885 / 4863489 11 / 62650 0 / 27007 687 / 5278419 885 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 11 / 46553 2 / 104307 73 / 43166038 1086 / 30312656 11 / 46553 2 / 104307 73 / 43166038 1086 / 30312656
muscle 7 / 74039 2 / 27691 4 / 107836 1 / 61270 7 / 74039 2 / 27691 4 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 16 / 89988 9 / 94887 7 / 179472 1 / 11462 16 / 89988 9 / 94887 7 / 179472
pancreas   2 / 74930   3 / 189999 0 / 7237 2 / 74930 0 / 85728 3 / 189999
pancreatic islet 8 / 96524   -- -- 8 / 96524 0 / 30072 -- --
parathyroid   8 / 20557 -- -- 0 / 24 8 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 21 / 241088   26 / 207348 -- 21 / 241088 0 / 39531 26 / 207348 --
pooled tissue 17 / 276455   -- -- 17 / 276455 0 / 0 -- --
prostate 3 / 79993 1 / 107080 13 / 266949 25 / 491794 3 / 79993 1 / 107080 13 / 266949 25 / 491794
retina   -- 449 / 820326 5 / 88490 0 / 29438 -- 449 / 820326 5 / 88490
salivary gland 3 / 2490   -- -- 3 / 2490 0 / 10368 -- --
skin 11 / 73633   3982 / 26905847 8452 / 34522313 11 / 73633 0 / 125377 3982 / 26905847 8452 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 5 / 52939   -- -- 5 / 52939 0 / 5 -- --
stem cell -- -- 269 / 6230144 -- -- -- 269 / 6230144 --
stomach 2 / 26641 5 / 65644 6 / 124767 18 / 448716 2 / 26641 5 / 65644 6 / 124767 18 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630   -- 3620 / 12372003 3 / 143630 0 / 100058 -- 3620 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     10 / 115938 4 / 124664 0 / 11737 0 / 32606 10 / 115938 4 / 124664
uncharacterized tissue 8 / 207932 7 / 479819 1 / 21833 7 / 51729 8 / 207932 7 / 479819 1 / 21833 7 / 51729
uterus 22 / 38063 4 / 133582 290 / 10193077 -- 22 / 38063 4 / 133582 290 / 10193077 --
vascular 1 / 46250 -- 1217 / 13135050 -- 1 / 46250 -- 1217 / 13135050 --
white blood cells -- -- 9 / 846268 -- -- -- 9 / 846268 --
whole body -- -- -- -- -- -- -- --