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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.474949Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 164 / 3316537 162 / 2498449 9720 / 114162531 10401 / 109592465 164 / 3316537 162 / 2498449 9720 / 114162531 10401 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 3 / 16077 7 / 57865 -- 1 / 83577 3 / 16077 7 / 57865 -- 1 / 83577
bone marrow 1 / 14774 1 / 29891 1017 / 5047110 327 / 4978364 1 / 14774 1 / 29891 1017 / 5047110 327 / 4978364
brain 9 / 506301 16 / 200215 26 / 729526 366 / 4997811 9 / 506301 16 / 200215 26 / 729526 366 / 4997811
cartilage     -- 31 / 778035 0 / 15965 0 / 37226 -- 31 / 778035
cerebellum 2 / 90353   5 / 90885 100 / 1495938 2 / 90353 0 / 0 5 / 90885 100 / 1495938
cerebrum 18 / 198932   -- -- 18 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon   5 / 151167 3 / 98089 24 / 643586 0 / 26551 5 / 151167 3 / 98089 24 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 19 / 246043   -- -- 19 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 12 / 128826 2 / 46440 4 / 85898 1264 / 12434232 12 / 128826 2 / 46440 4 / 85898 1264 / 12434232
gastrointestinal tract 1 / 28803   3 / 45908 -- 1 / 28803 0 / 12721 3 / 45908 --
heart 11 / 76442   9 / 83063 -- 11 / 76442 0 / 1 9 / 83063 --
kidney 2 / 106627 11 / 89898 14 / 155372 5 / 100281 2 / 106627 11 / 89898 14 / 155372 5 / 100281
limb -- -- -- -- -- -- -- --
liver 9 / 96846 5 / 107249 1 / 66308   9 / 96846 5 / 107249 1 / 66308 0 / 214987
lung 7 / 128150 10 / 170663 8 / 159917 8 / 159059 7 / 128150 10 / 170663 8 / 159917 8 / 159059
lymph node 1 / 62650 1 / 27007 471 / 5278419 941 / 4863489 1 / 62650 1 / 27007 471 / 5278419 941 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland   6 / 104307 2630 / 43166038 1687 / 30312656 0 / 46553 6 / 104307 2630 / 43166038 1687 / 30312656
muscle 5 / 74039 1 / 27691 8 / 107836 10 / 61270 5 / 74039 1 / 27691 8 / 107836 10 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     5 / 94887 3 / 179472 0 / 11462 0 / 89988 5 / 94887 3 / 179472
pancreas   1 / 74930 5 / 85728 6 / 189999 0 / 7237 1 / 74930 5 / 85728 6 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 2 / 6170 -- -- -- 2 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 3 / 241088 6 / 39531 7 / 207348 -- 3 / 241088 6 / 39531 7 / 207348 --
pooled tissue 31 / 276455   -- -- 31 / 276455 0 / 0 -- --
prostate 3 / 79993 10 / 107080 18 / 266949 29 / 491794 3 / 79993 10 / 107080 18 / 266949 29 / 491794
retina 3 / 29438 -- 35 / 820326 6 / 88490 3 / 29438 -- 35 / 820326 6 / 88490
salivary gland   4 / 10368 -- -- 0 / 2490 4 / 10368 -- --
skin 1 / 73633 15 / 125377 2842 / 26905847 4904 / 34522313 1 / 73633 15 / 125377 2842 / 26905847 4904 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 847 / 6230144 -- -- -- 847 / 6230144 --
stomach   2 / 65644 4 / 124767 32 / 448716 0 / 26641 2 / 65644 4 / 124767 32 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630 3 / 100058 -- 650 / 12372003 4 / 143630 3 / 100058 -- 650 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     11 / 115938 5 / 124664 0 / 11737 0 / 32606 11 / 115938 5 / 124664
uncharacterized tissue 12 / 207932 44 / 479819   2 / 51729 12 / 207932 44 / 479819 0 / 21833 2 / 51729
uterus 2 / 38063 10 / 133582 583 / 10193077 -- 2 / 38063 10 / 133582 583 / 10193077 --
vascular 1 / 46250 -- 1053 / 13135050 -- 1 / 46250 -- 1053 / 13135050 --
white blood cells -- -- 111 / 846268 -- -- -- 111 / 846268 --
whole body -- -- -- -- -- -- -- --