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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.47338Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 277 / 3316537 127 / 2498449 2900 / 114162531 1715 / 109592465 277 / 3316537 127 / 2498449 2900 / 114162531 1715 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     -- 2 / 83577 0 / 16077 0 / 57865 -- 2 / 83577
bone marrow   1 / 29891 16 / 5047110 28 / 4978364 0 / 14774 1 / 29891 16 / 5047110 28 / 4978364
brain 27 / 506301 12 / 200215 12 / 729526 100 / 4997811 27 / 506301 12 / 200215 12 / 729526 100 / 4997811
cartilage 3 / 15965   -- 14 / 778035 3 / 15965 0 / 37226 -- 14 / 778035
cerebellum 5 / 90353   2 / 90885 16 / 1495938 5 / 90353 0 / 0 2 / 90885 16 / 1495938
cerebrum 16 / 198932 1 / 3422 -- -- 16 / 198932 1 / 3422 -- --
cervix   8 / 44577 -- -- 0 / 3888 8 / 44577 -- --
colon   6 / 151167 1 / 98089 18 / 643586 0 / 26551 6 / 151167 1 / 98089 18 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 1 / 246043   -- -- 1 / 246043 0 / 38 -- --
endocrine 8 / 19564 2 / 2857 -- -- 8 / 19564 2 / 2857 -- --
esophagus   7 / 17290 -- -- 0 / 270 7 / 17290 -- --
eye 4 / 128826   1 / 85898 332 / 12434232 4 / 128826 0 / 46440 1 / 85898 332 / 12434232
gastrointestinal tract 9 / 28803     -- 9 / 28803 0 / 12721 0 / 45908 --
heart 7 / 76442   2 / 83063 -- 7 / 76442 0 / 1 2 / 83063 --
kidney 11 / 106627 3 / 89898 4 / 155372 1 / 100281 11 / 106627 3 / 89898 4 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 6 / 107249 1 / 66308 2 / 214987 2 / 96846 6 / 107249 1 / 66308 2 / 214987
lung 19 / 128150   2 / 159917 3 / 159059 19 / 128150 0 / 170663 2 / 159917 3 / 159059
lymph node   4 / 27007 73 / 5278419 10 / 4863489 0 / 62650 4 / 27007 73 / 5278419 10 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 1 / 46553 14 / 104307 174 / 43166038 461 / 30312656 1 / 46553 14 / 104307 174 / 43166038 461 / 30312656
muscle 3 / 74039   2 / 107836 1 / 61270 3 / 74039 0 / 27691 2 / 107836 1 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 2 / 89988 1 / 94887 9 / 179472 1 / 11462 2 / 89988 1 / 94887 9 / 179472
pancreas   4 / 74930   1 / 189999 0 / 7237 4 / 74930 0 / 85728 1 / 189999
pancreatic islet 3 / 96524   -- -- 3 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 32 / 241088   1 / 207348 -- 32 / 241088 0 / 39531 1 / 207348 --
pooled tissue 4 / 276455   -- -- 4 / 276455 0 / 0 -- --
prostate 4 / 79993 2 / 107080 11 / 266949 9 / 491794 4 / 79993 2 / 107080 11 / 266949 9 / 491794
retina   -- 34 / 820326 2 / 88490 0 / 29438 -- 34 / 820326 2 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 4 / 73633 6 / 125377 1320 / 26905847 475 / 34522313 4 / 73633 6 / 125377 1320 / 26905847 475 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 16 / 52939   -- -- 16 / 52939 0 / 5 -- --
stem cell -- -- 532 / 6230144 -- -- -- 532 / 6230144 --
stomach 2 / 26641 8 / 65644 2 / 124767 7 / 448716 2 / 26641 8 / 65644 2 / 124767 7 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630   -- 218 / 12372003 4 / 143630 0 / 100058 -- 218 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     5 / 115938 4 / 124664 0 / 11737 0 / 32606 5 / 115938 4 / 124664
uncharacterized tissue 85 / 207932 27 / 479819   2 / 51729 85 / 207932 27 / 479819 0 / 21833 2 / 51729
uterus 1 / 38063 14 / 133582 213 / 10193077 -- 1 / 38063 14 / 133582 213 / 10193077 --
vascular 3 / 46250 -- 476 / 13135050 -- 3 / 46250 -- 476 / 13135050 --
white blood cells -- -- 15 / 846268 -- -- -- 15 / 846268 --
whole body -- -- -- -- -- -- -- --