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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.469840Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 173 / 3316537 77 / 2498449 1336 / 114162531 1818 / 109592465 173 / 3316537 77 / 2498449 1336 / 114162531 1818 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   3 / 57865 --   0 / 16077 3 / 57865 -- 0 / 83577
bone marrow     3 / 5047110 20 / 4978364 0 / 14774 0 / 29891 3 / 5047110 20 / 4978364
brain 61 / 506301 7 / 200215 38 / 729526 183 / 4997811 61 / 506301 7 / 200215 38 / 729526 183 / 4997811
cartilage 1 / 15965   -- 5 / 778035 1 / 15965 0 / 37226 -- 5 / 778035
cerebellum 9 / 90353   7 / 90885 75 / 1495938 9 / 90353 0 / 0 7 / 90885 75 / 1495938
cerebrum 14 / 198932   -- -- 14 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   2 / 151167 1 / 98089 3 / 643586 0 / 26551 2 / 151167 1 / 98089 3 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 15 / 246043   -- -- 15 / 246043 0 / 38 -- --
endocrine   1 / 2857 -- -- 0 / 19564 1 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 5 / 128826 4 / 46440 7 / 85898 193 / 12434232 5 / 128826 4 / 46440 7 / 85898 193 / 12434232
gastrointestinal tract     1 / 45908 -- 0 / 28803 0 / 12721 1 / 45908 --
heart 1 / 76442   3 / 83063 -- 1 / 76442 0 / 1 3 / 83063 --
kidney   1 / 89898     0 / 106627 1 / 89898 0 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 9 / 107249   1 / 214987 1 / 96846 9 / 107249 0 / 66308 1 / 214987
lung 3 / 128150 1 / 170663 6 / 159917 3 / 159059 3 / 128150 1 / 170663 6 / 159917 3 / 159059
lymph node 6 / 62650   114 / 5278419 29 / 4863489 6 / 62650 0 / 27007 114 / 5278419 29 / 4863489
lymphoreticular 2 / 17836   -- -- 2 / 17836 0 / 44303 -- --
mammary gland 9 / 46553 9 / 104307 123 / 43166038 577 / 30312656 9 / 46553 9 / 104307 123 / 43166038 577 / 30312656
muscle 6 / 74039   2 / 107836 3 / 61270 6 / 74039 0 / 27691 2 / 107836 3 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary       2 / 179472 0 / 11462 0 / 89988 0 / 94887 2 / 179472
pancreas   2 / 74930 3 / 85728   0 / 7237 2 / 74930 3 / 85728 0 / 189999
pancreatic islet 3 / 96524   -- -- 3 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 4 / 241088   1 / 207348 -- 4 / 241088 0 / 39531 1 / 207348 --
pooled tissue 15 / 276455   -- -- 15 / 276455 0 / 0 -- --
prostate 3 / 79993 3 / 107080 14 / 266949 2 / 491794 3 / 79993 3 / 107080 14 / 266949 2 / 491794
retina 2 / 29438 -- 59 / 820326 10 / 88490 2 / 29438 -- 59 / 820326 10 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633 4 / 125377 289 / 26905847 458 / 34522313 1 / 73633 4 / 125377 289 / 26905847 458 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 72 / 6230144 -- -- -- 72 / 6230144 --
stomach   2 / 65644 2 / 124767 7 / 448716 0 / 26641 2 / 65644 2 / 124767 7 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 7 / 143630 10 / 100058 -- 241 / 12372003 7 / 143630 10 / 100058 -- 241 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737   5 / 115938 6 / 124664 1 / 11737 0 / 32606 5 / 115938 6 / 124664
uncharacterized tissue 2 / 207932 18 / 479819     2 / 207932 18 / 479819 0 / 21833 0 / 51729
uterus 1 / 38063 1 / 133582 432 / 10193077 -- 1 / 38063 1 / 133582 432 / 10193077 --
vascular   -- 148 / 13135050 -- 0 / 46250 -- 148 / 13135050 --
white blood cells -- -- 6 / 846268 -- -- -- 6 / 846268 --
whole body -- -- -- -- -- -- -- --