Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.469630Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 177 / 3316537 78 / 2498449 10353 / 114162531 12512 / 109592465 177 / 3316537 78 / 2498449 10353 / 114162531 12512 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   2 / 57865 --   0 / 16077 2 / 57865 -- 0 / 83577
bone marrow     73 / 5047110 150 / 4978364 0 / 14774 0 / 29891 73 / 5047110 150 / 4978364
brain 23 / 506301 3 / 200215 83 / 729526 336 / 4997811 23 / 506301 3 / 200215 83 / 729526 336 / 4997811
cartilage 1 / 15965 5 / 37226 -- 22 / 778035 1 / 15965 5 / 37226 -- 22 / 778035
cerebellum 2 / 90353   10 / 90885 161 / 1495938 2 / 90353 0 / 0 10 / 90885 161 / 1495938
cerebrum 23 / 198932   -- -- 23 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   9 / 151167 1 / 98089 17 / 643586 0 / 26551 9 / 151167 1 / 98089 17 / 643586
ear 3 / 16130 -- -- -- 3 / 16130 -- -- --
embryonic tissue 10 / 246043   -- -- 10 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 12 / 128826   1 / 85898 1952 / 12434232 12 / 128826 0 / 46440 1 / 85898 1952 / 12434232
gastrointestinal tract 1 / 28803 2 / 12721 3 / 45908 -- 1 / 28803 2 / 12721 3 / 45908 --
heart 4 / 76442   4 / 83063 -- 4 / 76442 0 / 1 4 / 83063 --
kidney 7 / 106627   17 / 155372 1 / 100281 7 / 106627 0 / 89898 17 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846   3 / 66308 7 / 214987 2 / 96846 0 / 107249 3 / 66308 7 / 214987
lung 5 / 128150 7 / 170663 5 / 159917 7 / 159059 5 / 128150 7 / 170663 5 / 159917 7 / 159059
lymph node   2 / 27007 344 / 5278419 66 / 4863489 0 / 62650 2 / 27007 344 / 5278419 66 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 2 / 46553 1 / 104307 463 / 43166038 3096 / 30312656 2 / 46553 1 / 104307 463 / 43166038 3096 / 30312656
muscle 7 / 74039     11 / 61270 7 / 74039 0 / 27691 0 / 107836 11 / 61270
nervous 2 / 10333   -- -- 2 / 10333 0 / 8 -- --
ovary   3 / 89988 5 / 94887 10 / 179472 0 / 11462 3 / 89988 5 / 94887 10 / 179472
pancreas     10 / 85728 15 / 189999 0 / 7237 0 / 74930 10 / 85728 15 / 189999
pancreatic islet 9 / 96524   -- -- 9 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 15 / 241088   16 / 207348 -- 15 / 241088 0 / 39531 16 / 207348 --
pooled tissue 16 / 276455   -- -- 16 / 276455 0 / 0 -- --
prostate 1 / 79993 3 / 107080 3 / 266949 14 / 491794 1 / 79993 3 / 107080 3 / 266949 14 / 491794
retina   -- 108 / 820326 17 / 88490 0 / 29438 -- 108 / 820326 17 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 1 / 73633 3 / 125377 5308 / 26905847 5800 / 34522313 1 / 73633 3 / 125377 5308 / 26905847 5800 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 706 / 6230144 -- -- -- 706 / 6230144 --
stomach     5 / 124767 34 / 448716 0 / 26641 0 / 65644 5 / 124767 34 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 20 / 143630 9 / 100058 -- 784 / 12372003 20 / 143630 9 / 100058 -- 784 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 1 / 11737 3 / 32606 7 / 115938 11 / 124664 1 / 11737 3 / 32606 7 / 115938 11 / 124664
uncharacterized tissue 6 / 207932 16 / 479819 2 / 21833 1 / 51729 6 / 207932 16 / 479819 2 / 21833 1 / 51729
uterus   8 / 133582 1602 / 10193077 -- 0 / 38063 8 / 133582 1602 / 10193077 --
vascular 2 / 46250 -- 1523 / 13135050 -- 2 / 46250 -- 1523 / 13135050 --
white blood cells -- -- 51 / 846268 -- -- -- 51 / 846268 --
whole body -- -- -- -- -- -- -- --