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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.466871Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 124 / 3316537 139 / 2498449 5707 / 114162531 5485 / 109592465 124 / 3316537 139 / 2498449 5707 / 114162531 5485 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 6 / 57865 -- 3 / 83577 2 / 16077 6 / 57865 -- 3 / 83577
bone marrow 1 / 14774   1475 / 5047110 929 / 4978364 1 / 14774 0 / 29891 1475 / 5047110 929 / 4978364
brain 9 / 506301 1 / 200215 2 / 729526 23 / 4997811 9 / 506301 1 / 200215 2 / 729526 23 / 4997811
cartilage   7 / 37226 -- 16 / 778035 0 / 15965 7 / 37226 -- 16 / 778035
cerebellum       3 / 1495938 0 / 90353 0 / 0 0 / 90885 3 / 1495938
cerebrum   1 / 3422 -- -- 0 / 198932 1 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon 2 / 26551 22 / 151167 7 / 98089 10 / 643586 2 / 26551 22 / 151167 7 / 98089 10 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 8 / 246043   -- -- 8 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 7 / 128826 1 / 46440   23 / 12434232 7 / 128826 1 / 46440 0 / 85898 23 / 12434232
gastrointestinal tract 1 / 28803     -- 1 / 28803 0 / 12721 0 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 2 / 106627 5 / 89898   4 / 100281 2 / 106627 5 / 89898 0 / 155372 4 / 100281
limb -- -- -- -- -- -- -- --
liver 3 / 96846 8 / 107249   3 / 214987 3 / 96846 8 / 107249 0 / 66308 3 / 214987
lung 10 / 128150 15 / 170663 2 / 159917 3 / 159059 10 / 128150 15 / 170663 2 / 159917 3 / 159059
lymph node     5 / 5278419 1 / 4863489 0 / 62650 0 / 27007 5 / 5278419 1 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 5 / 46553 3 / 104307 3212 / 43166038 3407 / 30312656 5 / 46553 3 / 104307 3212 / 43166038 3407 / 30312656
muscle 8 / 74039       8 / 74039 0 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 6 / 11462 12 / 89988 2 / 94887 10 / 179472 6 / 11462 12 / 89988 2 / 94887 10 / 179472
pancreas   9 / 74930 1 / 85728 15 / 189999 0 / 7237 9 / 74930 1 / 85728 15 / 189999
pancreatic islet 13 / 96524   -- -- 13 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 4 / 241088     -- 4 / 241088 0 / 39531 0 / 207348 --
pooled tissue 4 / 276455   -- -- 4 / 276455 0 / 0 -- --
prostate   1 / 107080   4 / 491794 0 / 79993 1 / 107080 0 / 266949 4 / 491794
retina   -- 1 / 820326   0 / 29438 -- 1 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 14 / 73633 7 / 125377 45 / 26905847 960 / 34522313 14 / 73633 7 / 125377 45 / 26905847 960 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 19 / 6230144 -- -- -- 19 / 6230144 --
stomach   7 / 65644   8 / 448716 0 / 26641 7 / 65644 0 / 124767 8 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis     -- 62 / 12372003 0 / 143630 0 / 100058 -- 62 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   5 / 32606     0 / 11737 5 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 21 / 207932 19 / 479819 3 / 21833 1 / 51729 21 / 207932 19 / 479819 3 / 21833 1 / 51729
uterus   5 / 133582 22 / 10193077 -- 0 / 38063 5 / 133582 22 / 10193077 --
vascular 2 / 46250 -- 802 / 13135050 -- 2 / 46250 -- 802 / 13135050 --
white blood cells -- -- 109 / 846268 -- -- -- 109 / 846268 --
whole body -- -- -- -- -- -- -- --