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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.465627Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 229 / 3316537 364 / 2498449 11798 / 114162531 7525 / 109592465 229 / 3316537 364 / 2498449 11798 / 114162531 7525 / 109592465
adrenal cortex -- 3 / 9928 -- -- -- 3 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 8 / 57865 -- 59 / 83577 1 / 16077 8 / 57865 -- 59 / 83577
bone marrow     93 / 5047110 112 / 4978364 0 / 14774 0 / 29891 93 / 5047110 112 / 4978364
brain 17 / 506301 53 / 200215 132 / 729526 764 / 4997811 17 / 506301 53 / 200215 132 / 729526 764 / 4997811
cartilage 1 / 15965 8 / 37226 -- 255 / 778035 1 / 15965 8 / 37226 -- 255 / 778035
cerebellum     18 / 90885 155 / 1495938 0 / 90353 0 / 0 18 / 90885 155 / 1495938
cerebrum 7 / 198932   -- -- 7 / 198932 0 / 3422 -- --
cervix   5 / 44577 -- -- 0 / 3888 5 / 44577 -- --
colon 5 / 26551 31 / 151167 32 / 98089 205 / 643586 5 / 26551 31 / 151167 32 / 98089 205 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 25 / 246043   -- -- 25 / 246043 0 / 38 -- --
endocrine 1 / 19564   -- -- 1 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 13 / 128826 5 / 46440 16 / 85898 788 / 12434232 13 / 128826 5 / 46440 16 / 85898 788 / 12434232
gastrointestinal tract     1 / 45908 -- 0 / 28803 0 / 12721 1 / 45908 --
heart 4 / 76442   4 / 83063 -- 4 / 76442 0 / 1 4 / 83063 --
kidney 1 / 106627 5 / 89898 22 / 155372 9 / 100281 1 / 106627 5 / 89898 22 / 155372 9 / 100281
limb -- -- -- -- -- -- -- --
liver   8 / 107249 5 / 66308 31 / 214987 0 / 96846 8 / 107249 5 / 66308 31 / 214987
lung 16 / 128150 34 / 170663 30 / 159917 16 / 159059 16 / 128150 34 / 170663 30 / 159917 16 / 159059
lymph node 20 / 62650 2 / 27007 500 / 5278419 32 / 4863489 20 / 62650 2 / 27007 500 / 5278419 32 / 4863489
lymphoreticular 1 / 17836 8 / 44303 -- -- 1 / 17836 8 / 44303 -- --
mammary gland 3 / 46553 25 / 104307 6128 / 43166038 1401 / 30312656 3 / 46553 25 / 104307 6128 / 43166038 1401 / 30312656
muscle 7 / 74039 4 / 27691 21 / 107836 8 / 61270 7 / 74039 4 / 27691 21 / 107836 8 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 3 / 11462 24 / 89988 10 / 94887 38 / 179472 3 / 11462 24 / 89988 10 / 94887 38 / 179472
pancreas 1 / 7237 14 / 74930 10 / 85728 41 / 189999 1 / 7237 14 / 74930 10 / 85728 41 / 189999
pancreatic islet 8 / 96524 8 / 30072 -- -- 8 / 96524 8 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 4 / 14891   -- -- 4 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 5 / 241088 7 / 39531 23 / 207348 -- 5 / 241088 7 / 39531 23 / 207348 --
pooled tissue 38 / 276455   -- -- 38 / 276455 0 / 0 -- --
prostate 16 / 79993 13 / 107080 31 / 266949 82 / 491794 16 / 79993 13 / 107080 31 / 266949 82 / 491794
retina 4 / 29438 -- 125 / 820326 5 / 88490 4 / 29438 -- 125 / 820326 5 / 88490
salivary gland   5 / 10368 -- -- 0 / 2490 5 / 10368 -- --
skin 7 / 73633 31 / 125377 2093 / 26905847 2710 / 34522313 7 / 73633 31 / 125377 2093 / 26905847 2710 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 474 / 6230144 -- -- -- 474 / 6230144 --
stomach 1 / 26641 3 / 65644 6 / 124767 47 / 448716 1 / 26641 3 / 65644 6 / 124767 47 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 8 / 143630 4 / 100058 -- 754 / 12372003 8 / 143630 4 / 100058 -- 754 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid   1 / 32606 10 / 115938 8 / 124664 0 / 11737 1 / 32606 10 / 115938 8 / 124664
uncharacterized tissue 9 / 207932 42 / 479819 8 / 21833 5 / 51729 9 / 207932 42 / 479819 8 / 21833 5 / 51729
uterus   13 / 133582 536 / 10193077 -- 0 / 38063 13 / 133582 536 / 10193077 --
vascular   -- 1380 / 13135050 -- 0 / 46250 -- 1380 / 13135050 --
white blood cells -- -- 90 / 846268 -- -- -- 90 / 846268 --
whole body -- -- -- -- -- -- -- --