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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.464419Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 23 / 3316537 26 / 2498449 3382 / 114162531 1968 / 109592465 23 / 3316537 26 / 2498449 3382 / 114162531 1968 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 1 / 16077 3 / 57865 -- 5 / 83577 1 / 16077 3 / 57865 -- 5 / 83577
bone marrow     162 / 5047110 166 / 4978364 0 / 14774 0 / 29891 162 / 5047110 166 / 4978364
brain 1 / 506301 1 / 200215 5 / 729526 53 / 4997811 1 / 506301 1 / 200215 5 / 729526 53 / 4997811
cartilage   1 / 37226 -- 30 / 778035 0 / 15965 1 / 37226 -- 30 / 778035
cerebellum     1 / 90885 9 / 1495938 0 / 90353 0 / 0 1 / 90885 9 / 1495938
cerebrum 1 / 198932   -- -- 1 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon     2 / 98089 53 / 643586 0 / 26551 0 / 151167 2 / 98089 53 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 1 / 246043   -- -- 1 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 2 / 128826     91 / 12434232 2 / 128826 0 / 46440 0 / 85898 91 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 1 / 106627   4 / 155372 6 / 100281 1 / 106627 0 / 89898 4 / 155372 6 / 100281
limb -- -- -- -- -- -- -- --
liver       5 / 214987 0 / 96846 0 / 107249 0 / 66308 5 / 214987
lung   2 / 170663 4 / 159917 7 / 159059 0 / 128150 2 / 170663 4 / 159917 7 / 159059
lymph node     63 / 5278419 8 / 4863489 0 / 62650 0 / 27007 63 / 5278419 8 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 4 / 46553 1 / 104307 1926 / 43166038 642 / 30312656 4 / 46553 1 / 104307 1926 / 43166038 642 / 30312656
muscle 2 / 74039   1 / 107836 3 / 61270 2 / 74039 0 / 27691 1 / 107836 3 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     1 / 94887 7 / 179472 0 / 11462 0 / 89988 1 / 94887 7 / 179472
pancreas   1 / 74930 2 / 85728 1 / 189999 0 / 7237 1 / 74930 2 / 85728 1 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta     1 / 207348 -- 0 / 241088 0 / 39531 1 / 207348 --
pooled tissue     -- -- 0 / 276455 0 / 0 -- --
prostate 2 / 79993   2 / 266949 10 / 491794 2 / 79993 0 / 107080 2 / 266949 10 / 491794
retina   -- 3 / 820326   0 / 29438 -- 3 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 3 / 73633 8 / 125377 986 / 26905847 847 / 34522313 3 / 73633 8 / 125377 986 / 26905847 847 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 11 / 6230144 -- -- -- 11 / 6230144 --
stomach       8 / 448716 0 / 26641 0 / 65644 0 / 124767 8 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 1 / 143630 2 / 100058 -- 15 / 12372003 1 / 143630 2 / 100058 -- 15 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606   1 / 124664 0 / 11737 1 / 32606 0 / 115938 1 / 124664
uncharacterized tissue 2 / 207932 3 / 479819 1 / 21833 1 / 51729 2 / 207932 3 / 479819 1 / 21833 1 / 51729
uterus   3 / 133582 78 / 10193077 -- 0 / 38063 3 / 133582 78 / 10193077 --
vascular   -- 81 / 13135050 -- 0 / 46250 -- 81 / 13135050 --
white blood cells -- -- 48 / 846268 -- -- -- 48 / 846268 --
whole body -- -- -- -- -- -- -- --