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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.463978Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 58 / 3316537 50 / 2498449 1382 / 114162531 2280 / 109592465 58 / 3316537 50 / 2498449 1382 / 114162531 2280 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   3 / 57865 -- 3 / 83577 0 / 16077 3 / 57865 -- 3 / 83577
bone marrow     29 / 5047110 4 / 4978364 0 / 14774 0 / 29891 29 / 5047110 4 / 4978364
brain 13 / 506301 2 / 200215 6 / 729526 111 / 4997811 13 / 506301 2 / 200215 6 / 729526 111 / 4997811
cartilage   1 / 37226 -- 7 / 778035 0 / 15965 1 / 37226 -- 7 / 778035
cerebellum 1 / 90353     25 / 1495938 1 / 90353 0 / 0 0 / 90885 25 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix   1 / 44577 -- -- 0 / 3888 1 / 44577 -- --
colon 4 / 26551 1 / 151167 2 / 98089 32 / 643586 4 / 26551 1 / 151167 2 / 98089 32 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 4 / 246043   -- -- 4 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 4 / 128826 4 / 46440   68 / 12434232 4 / 128826 4 / 46440 0 / 85898 68 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 4 / 76442     -- 4 / 76442 0 / 1 0 / 83063 --
kidney 1 / 106627   7 / 155372   1 / 106627 0 / 89898 7 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 2 / 96846 1 / 107249 1 / 66308 2 / 214987 2 / 96846 1 / 107249 1 / 66308 2 / 214987
lung   5 / 170663 7 / 159917 2 / 159059 0 / 128150 5 / 170663 7 / 159917 2 / 159059
lymph node 3 / 62650   7 / 5278419 2 / 4863489 3 / 62650 0 / 27007 7 / 5278419 2 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland     45 / 43166038 409 / 30312656 0 / 46553 0 / 104307 45 / 43166038 409 / 30312656
muscle 5 / 74039 1 / 27691 2 / 107836   5 / 74039 1 / 27691 2 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary       4 / 179472 0 / 11462 0 / 89988 0 / 94887 4 / 179472
pancreas     2 / 85728 6 / 189999 0 / 7237 0 / 74930 2 / 85728 6 / 189999
pancreatic islet 3 / 96524   -- -- 3 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 4 / 241088   1 / 207348 -- 4 / 241088 0 / 39531 1 / 207348 --
pooled tissue 9 / 276455   -- -- 9 / 276455 0 / 0 -- --
prostate     8 / 266949 8 / 491794 0 / 79993 0 / 107080 8 / 266949 8 / 491794
retina   -- 12 / 820326   0 / 29438 -- 12 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   1 / 125377 405 / 26905847 1242 / 34522313 0 / 73633 1 / 125377 405 / 26905847 1242 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 482 / 6230144 -- -- -- 482 / 6230144 --
stomach       7 / 448716 0 / 26641 0 / 65644 0 / 124767 7 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 1 / 143630 3 / 100058 -- 348 / 12372003 1 / 143630 3 / 100058 -- 348 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 1 / 115938   0 / 11737 1 / 32606 1 / 115938 0 / 124664
uncharacterized tissue   19 / 479819 1 / 21833   0 / 207932 19 / 479819 1 / 21833 0 / 51729
uterus   7 / 133582 82 / 10193077 -- 0 / 38063 7 / 133582 82 / 10193077 --
vascular   -- 257 / 13135050 -- 0 / 46250 -- 257 / 13135050 --
white blood cells -- -- 25 / 846268 -- -- -- 25 / 846268 --
whole body -- -- -- -- -- -- -- --