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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.463035Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 369 / 3316537 256 / 2498449 2702 / 114162531 3622 / 109592465 369 / 3316537 256 / 2498449 2702 / 114162531 3622 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla -- 2 / 247 -- -- -- 2 / 247 -- --
bone 4 / 16077 10 / 57865 -- 16 / 83577 4 / 16077 10 / 57865 -- 16 / 83577
bone marrow     1 / 5047110   0 / 14774 0 / 29891 1 / 5047110 0 / 4978364
brain 53 / 506301 35 / 200215 24 / 729526 369 / 4997811 53 / 506301 35 / 200215 24 / 729526 369 / 4997811
cartilage 22 / 15965 2 / 37226 -- 68 / 778035 22 / 15965 2 / 37226 -- 68 / 778035
cerebellum 3 / 90353     39 / 1495938 3 / 90353 0 / 0 0 / 90885 39 / 1495938
cerebrum 3 / 198932 4 / 3422 -- -- 3 / 198932 4 / 3422 -- --
cervix 1 / 3888 8 / 44577 -- -- 1 / 3888 8 / 44577 -- --
colon   13 / 151167   18 / 643586 0 / 26551 13 / 151167 0 / 98089 18 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 42 / 246043   -- -- 42 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus   4 / 17290 -- -- 0 / 270 4 / 17290 -- --
eye 11 / 128826   8 / 85898 34 / 12434232 11 / 128826 0 / 46440 8 / 85898 34 / 12434232
gastrointestinal tract 5 / 28803 2 / 12721   -- 5 / 28803 2 / 12721 0 / 45908 --
heart 17 / 76442   1 / 83063 -- 17 / 76442 0 / 1 1 / 83063 --
kidney 22 / 106627 16 / 89898 1 / 155372 1 / 100281 22 / 106627 16 / 89898 1 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver   8 / 107249 1 / 66308 13 / 214987 0 / 96846 8 / 107249 1 / 66308 13 / 214987
lung 12 / 128150 12 / 170663 10 / 159917 17 / 159059 12 / 128150 12 / 170663 10 / 159917 17 / 159059
lymph node     32 / 5278419   0 / 62650 0 / 27007 32 / 5278419 0 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 7 / 46553 3 / 104307 1616 / 43166038 1938 / 30312656 7 / 46553 3 / 104307 1616 / 43166038 1938 / 30312656
muscle 2 / 74039     1 / 61270 2 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 3 / 11462 8 / 89988 6 / 94887 22 / 179472 3 / 11462 8 / 89988 6 / 94887 22 / 179472
pancreas   3 / 74930 3 / 85728 12 / 189999 0 / 7237 3 / 74930 3 / 85728 12 / 189999
pancreatic islet 5 / 96524   -- -- 5 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 4 / 14891   -- -- 4 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 41 / 241088   7 / 207348 -- 41 / 241088 0 / 39531 7 / 207348 --
pooled tissue 2 / 276455   -- -- 2 / 276455 0 / 0 -- --
prostate 9 / 79993 13 / 107080 11 / 266949 26 / 491794 9 / 79993 13 / 107080 11 / 266949 26 / 491794
retina 1 / 29438 -- 10 / 820326   1 / 29438 -- 10 / 820326 0 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin 27 / 73633 13 / 125377 75 / 26905847 811 / 34522313 27 / 73633 13 / 125377 75 / 26905847 811 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 3 / 52939   -- -- 3 / 52939 0 / 5 -- --
stem cell -- -- 169 / 6230144 -- -- -- 169 / 6230144 --
stomach 1 / 26641 5 / 65644 5 / 124767 16 / 448716 1 / 26641 5 / 65644 5 / 124767 16 / 448716
synovium   1 / 1650 -- -- 0 / 249 1 / 1650 -- --
testis 8 / 143630 10 / 100058 -- 215 / 12372003 8 / 143630 10 / 100058 -- 215 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid 6 / 11737 3 / 32606 5 / 115938   6 / 11737 3 / 32606 5 / 115938 0 / 124664
uncharacterized tissue 17 / 207932 70 / 479819 2 / 21833 6 / 51729 17 / 207932 70 / 479819 2 / 21833 6 / 51729
uterus 6 / 38063 10 / 133582 308 / 10193077 -- 6 / 38063 10 / 133582 308 / 10193077 --
vascular 26 / 46250 -- 405 / 13135050 -- 26 / 46250 -- 405 / 13135050 --
white blood cells -- -- 2 / 846268 -- -- -- 2 / 846268 --
whole body -- -- -- -- -- -- -- --