Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Tissues
  • Tools
  • SNPs by tissue
  • CGAP Data
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.462323Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 287 / 3316537 253 / 2498449 1081 / 114162531 904 / 109592465 287 / 3316537 253 / 2498449 1081 / 114162531 904 / 109592465
adrenal cortex -- 3 / 9928 -- -- -- 3 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 7 / 57865 --   2 / 16077 7 / 57865 -- 0 / 83577
bone marrow 1 / 14774 3 / 29891 21 / 5047110 13 / 4978364 1 / 14774 3 / 29891 21 / 5047110 13 / 4978364
brain 42 / 506301 22 / 200215 21 / 729526 89 / 4997811 42 / 506301 22 / 200215 21 / 729526 89 / 4997811
cartilage     -- 2 / 778035 0 / 15965 0 / 37226 -- 2 / 778035
cerebellum 8 / 90353   5 / 90885 24 / 1495938 8 / 90353 0 / 0 5 / 90885 24 / 1495938
cerebrum 11 / 198932   -- -- 11 / 198932 0 / 3422 -- --
cervix   5 / 44577 -- -- 0 / 3888 5 / 44577 -- --
colon 9 / 26551 27 / 151167 2 / 98089 2 / 643586 9 / 26551 27 / 151167 2 / 98089 2 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 26 / 246043   -- -- 26 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus   4 / 17290 -- -- 0 / 270 4 / 17290 -- --
eye 11 / 128826 4 / 46440 3 / 85898 91 / 12434232 11 / 128826 4 / 46440 3 / 85898 91 / 12434232
gastrointestinal tract 1 / 28803 1 / 12721 1 / 45908 -- 1 / 28803 1 / 12721 1 / 45908 --
heart 8 / 76442     -- 8 / 76442 0 / 1 0 / 83063 --
kidney 10 / 106627 11 / 89898 3 / 155372 1 / 100281 10 / 106627 11 / 89898 3 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver 5 / 96846 13 / 107249   1 / 214987 5 / 96846 13 / 107249 0 / 66308 1 / 214987
lung 21 / 128150 11 / 170663 3 / 159917   21 / 128150 11 / 170663 3 / 159917 0 / 159059
lymph node 10 / 62650 4 / 27007 143 / 5278419 24 / 4863489 10 / 62650 4 / 27007 143 / 5278419 24 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 2 / 46553 10 / 104307 207 / 43166038 298 / 30312656 2 / 46553 10 / 104307 207 / 43166038 298 / 30312656
muscle 3 / 74039 4 / 27691 2 / 107836   3 / 74039 4 / 27691 2 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary 1 / 11462 5 / 89988     1 / 11462 5 / 89988 0 / 94887 0 / 179472
pancreas   4 / 74930     0 / 7237 4 / 74930 0 / 85728 0 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 19 / 241088 5 / 39531 1 / 207348 -- 19 / 241088 5 / 39531 1 / 207348 --
pooled tissue 24 / 276455   -- -- 24 / 276455 0 / 0 -- --
prostate 8 / 79993 14 / 107080 3 / 266949 6 / 491794 8 / 79993 14 / 107080 3 / 266949 6 / 491794
retina 4 / 29438 -- 19 / 820326 3 / 88490 4 / 29438 -- 19 / 820326 3 / 88490
salivary gland   1 / 10368 -- -- 0 / 2490 1 / 10368 -- --
skin 2 / 73633 6 / 125377 123 / 26905847 163 / 34522313 2 / 73633 6 / 125377 123 / 26905847 163 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 68 / 6230144 -- -- -- 68 / 6230144 --
stomach 8 / 26641 9 / 65644 5 / 124767 14 / 448716 8 / 26641 9 / 65644 5 / 124767 14 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 16 / 143630 7 / 100058 -- 166 / 12372003 16 / 143630 7 / 100058 -- 166 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid 2 / 11737 5 / 32606 6 / 115938 7 / 124664 2 / 11737 5 / 32606 6 / 115938 7 / 124664
uncharacterized tissue 20 / 207932 41 / 479819     20 / 207932 41 / 479819 0 / 21833 0 / 51729
uterus 1 / 38063 24 / 133582 341 / 10193077 -- 1 / 38063 24 / 133582 341 / 10193077 --
vascular 3 / 46250 -- 90 / 13135050 -- 3 / 46250 -- 90 / 13135050 --
white blood cells -- -- 14 / 846268 -- -- -- 14 / 846268 --
whole body -- -- -- -- -- -- -- --