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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.459538Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 105 / 3316537 109 / 2498449 4171 / 114162531 600 / 109592465 105 / 3316537 109 / 2498449 4171 / 114162531 600 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   4 / 57865 --   0 / 16077 4 / 57865 -- 0 / 83577
bone marrow         0 / 14774 0 / 29891 0 / 5047110 0 / 4978364
brain 10 / 506301 8 / 200215 3 / 729526 8 / 4997811 10 / 506301 8 / 200215 3 / 729526 8 / 4997811
cartilage     -- 2 / 778035 0 / 15965 0 / 37226 -- 2 / 778035
cerebellum 3 / 90353   2 / 90885 16 / 1495938 3 / 90353 0 / 0 2 / 90885 16 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix   2 / 44577 -- -- 0 / 3888 2 / 44577 -- --
colon   18 / 151167   31 / 643586 0 / 26551 18 / 151167 0 / 98089 31 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 7 / 246043   -- -- 7 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 5 / 128826     5 / 12434232 5 / 128826 0 / 46440 0 / 85898 5 / 12434232
gastrointestinal tract 1 / 28803     -- 1 / 28803 0 / 12721 0 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney   3 / 89898     0 / 106627 3 / 89898 0 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver   8 / 107249   17 / 214987 0 / 96846 8 / 107249 0 / 66308 17 / 214987
lung 10 / 128150 1 / 170663   2 / 159059 10 / 128150 1 / 170663 0 / 159917 2 / 159059
lymph node 4 / 62650 1 / 27007 11 / 5278419   4 / 62650 1 / 27007 11 / 5278419 0 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland 7 / 46553 10 / 104307 3963 / 43166038 114 / 30312656 7 / 46553 10 / 104307 3963 / 43166038 114 / 30312656
muscle 1 / 74039 3 / 27691     1 / 74039 3 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary     30 / 94887 4 / 179472 0 / 11462 0 / 89988 30 / 94887 4 / 179472
pancreas   21 / 74930   18 / 189999 0 / 7237 21 / 74930 0 / 85728 18 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 3 / 241088     -- 3 / 241088 0 / 39531 0 / 207348 --
pooled tissue 3 / 276455   -- -- 3 / 276455 0 / 0 -- --
prostate 22 / 79993 7 / 107080 21 / 266949 32 / 491794 22 / 79993 7 / 107080 21 / 266949 32 / 491794
retina 1 / 29438 -- 1 / 820326   1 / 29438 -- 1 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 5 / 73633 7 / 125377 78 / 26905847 316 / 34522313 5 / 73633 7 / 125377 78 / 26905847 316 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 1 / 52939   -- -- 1 / 52939 0 / 5 -- --
stem cell -- -- 28 / 6230144 -- -- -- 28 / 6230144 --
stomach   3 / 65644 1 / 124767 6 / 448716 0 / 26641 3 / 65644 1 / 124767 6 / 448716
synovium   1 / 1650 -- -- 0 / 249 1 / 1650 -- --
testis 4 / 143630   -- 29 / 12372003 4 / 143630 0 / 100058 -- 29 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   2 / 32606     0 / 11737 2 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 2 / 207932 8 / 479819     2 / 207932 8 / 479819 0 / 21833 0 / 51729
uterus 6 / 38063   8 / 10193077 -- 6 / 38063 0 / 133582 8 / 10193077 --
vascular 4 / 46250 -- 25 / 13135050 -- 4 / 46250 -- 25 / 13135050 --
white blood cells -- --   -- -- -- 0 / 846268 --
whole body -- -- -- -- -- -- -- --