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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.458485Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 100 / 3316537 154 / 2498449 1951 / 114162531 6234 / 109592465 100 / 3316537 154 / 2498449 1951 / 114162531 6234 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   3 / 57865 -- 14 / 83577 0 / 16077 3 / 57865 -- 14 / 83577
bone marrow     17 / 5047110 22 / 4978364 0 / 14774 0 / 29891 17 / 5047110 22 / 4978364
brain 4 / 506301 8 / 200215 20 / 729526 352 / 4997811 4 / 506301 8 / 200215 20 / 729526 352 / 4997811
cartilage   1 / 37226 -- 96 / 778035 0 / 15965 1 / 37226 -- 96 / 778035
cerebellum       21 / 1495938 0 / 90353 0 / 0 0 / 90885 21 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix   5 / 44577 -- -- 0 / 3888 5 / 44577 -- --
colon   12 / 151167 19 / 98089 162 / 643586 0 / 26551 12 / 151167 19 / 98089 162 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 4 / 246043   -- -- 4 / 246043 0 / 38 -- --
endocrine   1 / 2857 -- -- 0 / 19564 1 / 2857 -- --
esophagus   2 / 17290 -- -- 0 / 270 2 / 17290 -- --
eye 6 / 128826   1 / 85898 126 / 12434232 6 / 128826 0 / 46440 1 / 85898 126 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 5 / 76442   2 / 83063 -- 5 / 76442 0 / 1 2 / 83063 --
kidney 2 / 106627   7 / 155372 17 / 100281 2 / 106627 0 / 89898 7 / 155372 17 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 7 / 107249   24 / 214987 4 / 96846 7 / 107249 0 / 66308 24 / 214987
lung 8 / 128150 1 / 170663 6 / 159917 5 / 159059 8 / 128150 1 / 170663 6 / 159917 5 / 159059
lymph node     350 / 5278419 29 / 4863489 0 / 62650 0 / 27007 350 / 5278419 29 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland   20 / 104307 302 / 43166038 3329 / 30312656 0 / 46553 20 / 104307 302 / 43166038 3329 / 30312656
muscle       21 / 61270 0 / 74039 0 / 27691 0 / 107836 21 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 7 / 89988 2 / 94887 63 / 179472 1 / 11462 7 / 89988 2 / 94887 63 / 179472
pancreas   11 / 74930 2 / 85728 31 / 189999 0 / 7237 11 / 74930 2 / 85728 31 / 189999
pancreatic islet 3 / 96524   -- -- 3 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 18 / 241088 2 / 39531 15 / 207348 -- 18 / 241088 2 / 39531 15 / 207348 --
pooled tissue 15 / 276455   -- -- 15 / 276455 0 / 0 -- --
prostate 13 / 79993 10 / 107080 11 / 266949 181 / 491794 13 / 79993 10 / 107080 11 / 266949 181 / 491794
retina   -- 15 / 820326   0 / 29438 -- 15 / 820326 0 / 88490
salivary gland   2 / 10368 -- -- 0 / 2490 2 / 10368 -- --
skin 2 / 73633 6 / 125377 292 / 26905847 1427 / 34522313 2 / 73633 6 / 125377 292 / 26905847 1427 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 239 / 6230144 -- -- -- 239 / 6230144 --
stomach     22 / 124767 96 / 448716 0 / 26641 0 / 65644 22 / 124767 96 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis     -- 211 / 12372003 0 / 143630 0 / 100058 -- 211 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid     3 / 115938 5 / 124664 0 / 11737 0 / 32606 3 / 115938 5 / 124664
uncharacterized tissue 6 / 207932 15 / 479819 1 / 21833 2 / 51729 6 / 207932 15 / 479819 1 / 21833 2 / 51729
uterus 8 / 38063 40 / 133582 42 / 10193077 -- 8 / 38063 40 / 133582 42 / 10193077 --
vascular   -- 517 / 13135050 -- 0 / 46250 -- 517 / 13135050 --
white blood cells -- -- 66 / 846268 -- -- -- 66 / 846268 --
whole body -- -- -- -- -- -- -- --