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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.458427Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 271 / 3316537 39 / 2498449 5392 / 114162531 7067 / 109592465 271 / 3316537 39 / 2498449 5392 / 114162531 7067 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone     --   0 / 16077 0 / 57865 -- 0 / 83577
bone marrow     6 / 5047110 6 / 4978364 0 / 14774 0 / 29891 6 / 5047110 6 / 4978364
brain 107 / 506301 2 / 200215 32 / 729526 161 / 4997811 107 / 506301 2 / 200215 32 / 729526 161 / 4997811
cartilage     -- 6 / 778035 0 / 15965 0 / 37226 -- 6 / 778035
cerebellum     1 / 90885 56 / 1495938 0 / 90353 0 / 0 1 / 90885 56 / 1495938
cerebrum 142 / 198932   -- -- 142 / 198932 0 / 3422 -- --
cervix     -- -- 0 / 3888 0 / 44577 -- --
colon   2 / 151167   20 / 643586 0 / 26551 2 / 151167 0 / 98089 20 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 2 / 246043   -- -- 2 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 2 / 128826   5 / 85898 1333 / 12434232 2 / 128826 0 / 46440 5 / 85898 1333 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart     1 / 83063 -- 0 / 76442 0 / 1 1 / 83063 --
kidney   2 / 89898 7 / 155372 1 / 100281 0 / 106627 2 / 89898 7 / 155372 1 / 100281
limb -- -- -- -- -- -- -- --
liver     1 / 66308 4 / 214987 0 / 96846 0 / 107249 1 / 66308 4 / 214987
lung   2 / 170663 4 / 159917 4 / 159059 0 / 128150 2 / 170663 4 / 159917 4 / 159059
lymph node     149 / 5278419 102 / 4863489 0 / 62650 0 / 27007 149 / 5278419 102 / 4863489
lymphoreticular     -- -- 0 / 17836 0 / 44303 -- --
mammary gland     1611 / 43166038 1332 / 30312656 0 / 46553 0 / 104307 1611 / 43166038 1332 / 30312656
muscle       3 / 61270 0 / 74039 0 / 27691 0 / 107836 3 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   4 / 89988 1 / 94887 9 / 179472 0 / 11462 4 / 89988 1 / 94887 9 / 179472
pancreas   2 / 74930 1 / 85728 3 / 189999 0 / 7237 2 / 74930 1 / 85728 3 / 189999
pancreatic islet 8 / 96524   -- -- 8 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 3 / 13260   -- -- 3 / 13260 0 / 1358 -- --
placenta     3 / 207348 -- 0 / 241088 0 / 39531 3 / 207348 --
pooled tissue 1 / 276455   -- -- 1 / 276455 0 / 0 -- --
prostate   5 / 107080 6 / 266949 12 / 491794 0 / 79993 5 / 107080 6 / 266949 12 / 491794
retina   -- 23 / 820326 10 / 88490 0 / 29438 -- 23 / 820326 10 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin     1819 / 26905847 3435 / 34522313 0 / 73633 0 / 125377 1819 / 26905847 3435 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen     -- -- 0 / 52939 0 / 5 -- --
stem cell -- -- 478 / 6230144 -- -- -- 478 / 6230144 --
stomach   1 / 65644 5 / 124767 4 / 448716 0 / 26641 1 / 65644 5 / 124767 4 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 5 / 143630 10 / 100058 -- 562 / 12372003 5 / 143630 10 / 100058 -- 562 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     5 / 115938 2 / 124664 0 / 11737 0 / 32606 5 / 115938 2 / 124664
uncharacterized tissue 1 / 207932 5 / 479819   2 / 51729 1 / 207932 5 / 479819 0 / 21833 2 / 51729
uterus   4 / 133582 280 / 10193077 -- 0 / 38063 4 / 133582 280 / 10193077 --
vascular   -- 910 / 13135050 -- 0 / 46250 -- 910 / 13135050 --
white blood cells -- -- 44 / 846268 -- -- -- 44 / 846268 --
whole body -- -- -- -- -- -- -- --