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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.448342Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 138 / 3316537 95 / 2498449 2348 / 114162531 369 / 109592465 138 / 3316537 95 / 2498449 2348 / 114162531 369 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   1 / 57865 -- 3 / 83577 0 / 16077 1 / 57865 -- 3 / 83577
bone marrow 1 / 14774       1 / 14774 0 / 29891 0 / 5047110 0 / 4978364
brain 16 / 506301 14 / 200215 11 / 729526 58 / 4997811 16 / 506301 14 / 200215 11 / 729526 58 / 4997811
cartilage   3 / 37226 -- 11 / 778035 0 / 15965 3 / 37226 -- 11 / 778035
cerebellum 1 / 90353     7 / 1495938 1 / 90353 0 / 0 0 / 90885 7 / 1495938
cerebrum 4 / 198932 1 / 3422 -- -- 4 / 198932 1 / 3422 -- --
cervix 1 / 3888 1 / 44577 -- -- 1 / 3888 1 / 44577 -- --
colon   3 / 151167   4 / 643586 0 / 26551 3 / 151167 0 / 98089 4 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 5 / 246043   -- -- 5 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 11 / 128826 1 / 46440 1 / 85898 47 / 12434232 11 / 128826 1 / 46440 1 / 85898 47 / 12434232
gastrointestinal tract       -- 0 / 28803 0 / 12721 0 / 45908 --
heart 4 / 76442     -- 4 / 76442 0 / 1 0 / 83063 --
kidney 3 / 106627 4 / 89898 1 / 155372   3 / 106627 4 / 89898 1 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 3 / 96846 1 / 107249   1 / 214987 3 / 96846 1 / 107249 0 / 66308 1 / 214987
lung 6 / 128150 9 / 170663     6 / 128150 9 / 170663 0 / 159917 0 / 159059
lymph node   1 / 27007 19 / 5278419 1 / 4863489 0 / 62650 1 / 27007 19 / 5278419 1 / 4863489
lymphoreticular   1 / 44303 -- -- 0 / 17836 1 / 44303 -- --
mammary gland 2 / 46553 4 / 104307 1950 / 43166038 92 / 30312656 2 / 46553 4 / 104307 1950 / 43166038 92 / 30312656
muscle 5 / 74039     1 / 61270 5 / 74039 0 / 27691 0 / 107836 1 / 61270
nervous 3 / 10333   -- -- 3 / 10333 0 / 8 -- --
ovary 1 / 11462 3 / 89988 3 / 94887 6 / 179472 1 / 11462 3 / 89988 3 / 94887 6 / 179472
pancreas   2 / 74930   1 / 189999 0 / 7237 2 / 74930 0 / 85728 1 / 189999
pancreatic islet 4 / 96524   -- -- 4 / 96524 0 / 30072 -- --
parathyroid     -- -- 0 / 24 0 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 13 / 241088 1 / 39531 1 / 207348 -- 13 / 241088 1 / 39531 1 / 207348 --
pooled tissue 11 / 276455   -- -- 11 / 276455 0 / 0 -- --
prostate 2 / 79993 5 / 107080 2 / 266949 4 / 491794 2 / 79993 5 / 107080 2 / 266949 4 / 491794
retina 4 / 29438 -- 3 / 820326   4 / 29438 -- 3 / 820326 0 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin 2 / 73633 3 / 125377 47 / 26905847 71 / 34522313 2 / 73633 3 / 125377 47 / 26905847 71 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 23 / 6230144 -- -- -- 23 / 6230144 --
stomach   3 / 65644   1 / 448716 0 / 26641 3 / 65644 0 / 124767 1 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 5 / 100058 -- 61 / 12372003 3 / 143630 5 / 100058 -- 61 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606     0 / 11737 1 / 32606 0 / 115938 0 / 124664
uncharacterized tissue 23 / 207932 19 / 479819     23 / 207932 19 / 479819 0 / 21833 0 / 51729
uterus 3 / 38063 9 / 133582 219 / 10193077 -- 3 / 38063 9 / 133582 219 / 10193077 --
vascular 1 / 46250 -- 66 / 13135050 -- 1 / 46250 -- 66 / 13135050 --
white blood cells -- -- 2 / 846268 -- -- -- 2 / 846268 --
whole body -- -- -- -- -- -- -- --