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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.446685Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 191 / 3316537 172 / 2498449 1231 / 114162531 1251 / 109592465 191 / 3316537 172 / 2498449 1231 / 114162531 1251 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   11 / 57865 --   0 / 16077 11 / 57865 -- 0 / 83577
bone marrow     4 / 5047110 15 / 4978364 0 / 14774 0 / 29891 4 / 5047110 15 / 4978364
brain 21 / 506301 17 / 200215 22 / 729526 234 / 4997811 21 / 506301 17 / 200215 22 / 729526 234 / 4997811
cartilage   1 / 37226 -- 29 / 778035 0 / 15965 1 / 37226 -- 29 / 778035
cerebellum 2 / 90353     63 / 1495938 2 / 90353 0 / 0 0 / 90885 63 / 1495938
cerebrum 4 / 198932   -- -- 4 / 198932 0 / 3422 -- --
cervix   5 / 44577 -- -- 0 / 3888 5 / 44577 -- --
colon 6 / 26551 3 / 151167 3 / 98089 8 / 643586 6 / 26551 3 / 151167 3 / 98089 8 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 7 / 246043   -- -- 7 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 9 / 128826   6 / 85898 97 / 12434232 9 / 128826 0 / 46440 6 / 85898 97 / 12434232
gastrointestinal tract 1 / 28803 2 / 12721 1 / 45908 -- 1 / 28803 2 / 12721 1 / 45908 --
heart 10 / 76442   20 / 83063 -- 10 / 76442 0 / 1 20 / 83063 --
kidney 5 / 106627 4 / 89898 5 / 155372 5 / 100281 5 / 106627 4 / 89898 5 / 155372 5 / 100281
limb -- -- -- -- -- -- -- --
liver 1 / 96846 7 / 107249 14 / 66308 1 / 214987 1 / 96846 7 / 107249 14 / 66308 1 / 214987
lung 11 / 128150 19 / 170663 4 / 159917 11 / 159059 11 / 128150 19 / 170663 4 / 159917 11 / 159059
lymph node 5 / 62650   46 / 5278419 26 / 4863489 5 / 62650 0 / 27007 46 / 5278419 26 / 4863489
lymphoreticular   5 / 44303 -- -- 0 / 17836 5 / 44303 -- --
mammary gland   5 / 104307 540 / 43166038 353 / 30312656 0 / 46553 5 / 104307 540 / 43166038 353 / 30312656
muscle 6 / 74039 1 / 27691 11 / 107836   6 / 74039 1 / 27691 11 / 107836 0 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   3 / 89988 1 / 94887 7 / 179472 0 / 11462 3 / 89988 1 / 94887 7 / 179472
pancreas   6 / 74930 3 / 85728 2 / 189999 0 / 7237 6 / 74930 3 / 85728 2 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid   7 / 20557 -- -- 0 / 24 7 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 2 / 13260   -- -- 2 / 13260 0 / 1358 -- --
placenta 22 / 241088 1 / 39531 6 / 207348 -- 22 / 241088 1 / 39531 6 / 207348 --
pooled tissue 24 / 276455   -- -- 24 / 276455 0 / 0 -- --
prostate 5 / 79993 13 / 107080 12 / 266949 29 / 491794 5 / 79993 13 / 107080 12 / 266949 29 / 491794
retina   -- 28 / 820326   0 / 29438 -- 28 / 820326 0 / 88490
salivary gland   3 / 10368 -- -- 0 / 2490 3 / 10368 -- --
skin 12 / 73633 17 / 125377 296 / 26905847 275 / 34522313 12 / 73633 17 / 125377 296 / 26905847 275 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 8 / 52939   -- -- 8 / 52939 0 / 5 -- --
stem cell -- -- 18 / 6230144 -- -- -- 18 / 6230144 --
stomach 1 / 26641 12 / 65644 1 / 124767 17 / 448716 1 / 26641 12 / 65644 1 / 124767 17 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 4 / 143630   -- 64 / 12372003 4 / 143630 0 / 100058 -- 64 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     7 / 115938 9 / 124664 0 / 11737 0 / 32606 7 / 115938 9 / 124664
uncharacterized tissue 6 / 207932 19 / 479819 1 / 21833 6 / 51729 6 / 207932 19 / 479819 1 / 21833 6 / 51729
uterus 9 / 38063 10 / 133582 134 / 10193077 -- 9 / 38063 10 / 133582 134 / 10193077 --
vascular 2 / 46250 -- 41 / 13135050 -- 2 / 46250 -- 41 / 13135050 --
white blood cells -- -- 7 / 846268 -- -- -- 7 / 846268 --
whole body -- -- -- -- -- -- -- --