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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.443960Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 80 / 3316537 125 / 2498449 493 / 114162531 1635 / 109592465 80 / 3316537 125 / 2498449 493 / 114162531 1635 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   2 / 57865 --   0 / 16077 2 / 57865 -- 0 / 83577
bone marrow     30 / 5047110 12 / 4978364 0 / 14774 0 / 29891 30 / 5047110 12 / 4978364
brain 9 / 506301 9 / 200215 4 / 729526 14 / 4997811 9 / 506301 9 / 200215 4 / 729526 14 / 4997811
cartilage   1 / 37226 -- 2 / 778035 0 / 15965 1 / 37226 -- 2 / 778035
cerebellum 1 / 90353     6 / 1495938 1 / 90353 0 / 0 0 / 90885 6 / 1495938
cerebrum     -- -- 0 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon   11 / 151167   9 / 643586 0 / 26551 11 / 151167 0 / 98089 9 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 18 / 246043   -- -- 18 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus     -- -- 0 / 270 0 / 17290 -- --
eye 1 / 128826 1 / 46440 1 / 85898 206 / 12434232 1 / 128826 1 / 46440 1 / 85898 206 / 12434232
gastrointestinal tract 4 / 28803 1 / 12721   -- 4 / 28803 1 / 12721 0 / 45908 --
heart       -- 0 / 76442 0 / 1 0 / 83063 --
kidney 1 / 106627 4 / 89898 6 / 155372   1 / 106627 4 / 89898 6 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 11 / 96846 2 / 107249   1 / 214987 11 / 96846 2 / 107249 0 / 66308 1 / 214987
lung 1 / 128150 18 / 170663     1 / 128150 18 / 170663 0 / 159917 0 / 159059
lymph node 4 / 62650   37 / 5278419 5 / 4863489 4 / 62650 0 / 27007 37 / 5278419 5 / 4863489
lymphoreticular   3 / 44303 -- -- 0 / 17836 3 / 44303 -- --
mammary gland   3 / 104307 46 / 43166038 176 / 30312656 0 / 46553 3 / 104307 46 / 43166038 176 / 30312656
muscle 1 / 74039 2 / 27691     1 / 74039 2 / 27691 0 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary 1 / 11462 3 / 89988 2 / 94887 2 / 179472 1 / 11462 3 / 89988 2 / 94887 2 / 179472
pancreas   4 / 74930   2 / 189999 0 / 7237 4 / 74930 0 / 85728 2 / 189999
pancreatic islet     -- -- 0 / 96524 0 / 30072 -- --
parathyroid   1 / 20557 -- -- 0 / 24 1 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland     -- -- 0 / 13260 0 / 1358 -- --
placenta 1 / 241088 3 / 39531   -- 1 / 241088 3 / 39531 0 / 207348 --
pooled tissue 10 / 276455   -- -- 10 / 276455 0 / 0 -- --
prostate   2 / 107080 2 / 266949 4 / 491794 0 / 79993 2 / 107080 2 / 266949 4 / 491794
retina   -- 2 / 820326 1 / 88490 0 / 29438 -- 2 / 820326 1 / 88490
salivary gland     -- -- 0 / 2490 0 / 10368 -- --
skin   7 / 125377 55 / 26905847 287 / 34522313 0 / 73633 7 / 125377 55 / 26905847 287 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 69 / 6230144 -- -- -- 69 / 6230144 --
stomach   10 / 65644 1 / 124767 4 / 448716 0 / 26641 10 / 65644 1 / 124767 4 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 1 / 100058 -- 902 / 12372003 3 / 143630 1 / 100058 -- 902 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     1 / 115938   0 / 11737 0 / 32606 1 / 115938 0 / 124664
uncharacterized tissue 6 / 207932 21 / 479819   2 / 51729 6 / 207932 21 / 479819 0 / 21833 2 / 51729
uterus 4 / 38063 13 / 133582 202 / 10193077 -- 4 / 38063 13 / 133582 202 / 10193077 --
vascular 1 / 46250 -- 31 / 13135050 -- 1 / 46250 -- 31 / 13135050 --
white blood cells -- -- 4 / 846268 -- -- -- 4 / 846268 --
whole body -- -- -- -- -- -- -- --