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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.438587Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 236 / 3316537 200 / 2498449 1981 / 114162531 632 / 109592465 236 / 3316537 200 / 2498449 1981 / 114162531 632 / 109592465
adrenal cortex --   -- -- -- 0 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 2 / 16077 1 / 57865 -- 3 / 83577 2 / 16077 1 / 57865 -- 3 / 83577
bone marrow   5 / 29891 5 / 5047110 8 / 4978364 0 / 14774 5 / 29891 5 / 5047110 8 / 4978364
brain 48 / 506301 15 / 200215 18 / 729526 72 / 4997811 48 / 506301 15 / 200215 18 / 729526 72 / 4997811
cartilage   2 / 37226 -- 8 / 778035 0 / 15965 2 / 37226 -- 8 / 778035
cerebellum 18 / 90353   4 / 90885 16 / 1495938 18 / 90353 0 / 0 4 / 90885 16 / 1495938
cerebrum 22 / 198932   -- -- 22 / 198932 0 / 3422 -- --
cervix   3 / 44577 -- -- 0 / 3888 3 / 44577 -- --
colon 1 / 26551 4 / 151167 3 / 98089 8 / 643586 1 / 26551 4 / 151167 3 / 98089 8 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 11 / 246043   -- -- 11 / 246043 0 / 38 -- --
endocrine     -- -- 0 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 10 / 128826 4 / 46440   57 / 12434232 10 / 128826 4 / 46440 0 / 85898 57 / 12434232
gastrointestinal tract 1 / 28803 3 / 12721 2 / 45908 -- 1 / 28803 3 / 12721 2 / 45908 --
heart 2 / 76442   1 / 83063 -- 2 / 76442 0 / 1 1 / 83063 --
kidney 2 / 106627 2 / 89898 4 / 155372   2 / 106627 2 / 89898 4 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 4 / 96846 4 / 107249     4 / 96846 4 / 107249 0 / 66308 0 / 214987
lung 7 / 128150 10 / 170663 2 / 159917 3 / 159059 7 / 128150 10 / 170663 2 / 159917 3 / 159059
lymph node 6 / 62650 3 / 27007 56 / 5278419 1 / 4863489 6 / 62650 3 / 27007 56 / 5278419 1 / 4863489
lymphoreticular   3 / 44303 -- -- 0 / 17836 3 / 44303 -- --
mammary gland 8 / 46553 3 / 104307 1540 / 43166038 206 / 30312656 8 / 46553 3 / 104307 1540 / 43166038 206 / 30312656
muscle 11 / 74039   2 / 107836   11 / 74039 0 / 27691 2 / 107836 0 / 61270
nervous     -- -- 0 / 10333 0 / 8 -- --
ovary   1 / 89988     0 / 11462 1 / 89988 0 / 94887 0 / 179472
pancreas   18 / 74930 2 / 85728   0 / 7237 18 / 74930 2 / 85728 0 / 189999
pancreatic islet 3 / 96524   -- -- 3 / 96524 0 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system 1 / 14891   -- -- 1 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 16 / 241088   3 / 207348 -- 16 / 241088 0 / 39531 3 / 207348 --
pooled tissue 15 / 276455   -- -- 15 / 276455 0 / 0 -- --
prostate 9 / 79993 4 / 107080 2 / 266949 4 / 491794 9 / 79993 4 / 107080 2 / 266949 4 / 491794
retina 5 / 29438 -- 9 / 820326 1 / 88490 5 / 29438 -- 9 / 820326 1 / 88490
salivary gland   3 / 10368 -- -- 0 / 2490 3 / 10368 -- --
skin 3 / 73633 9 / 125377 84 / 26905847 156 / 34522313 3 / 73633 9 / 125377 84 / 26905847 156 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 6 / 52939   -- -- 6 / 52939 0 / 5 -- --
stem cell -- -- 37 / 6230144 -- -- -- 37 / 6230144 --
stomach 1 / 26641 15 / 65644 1 / 124767 10 / 448716 1 / 26641 15 / 65644 1 / 124767 10 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 3 / 143630 10 / 100058 -- 77 / 12372003 3 / 143630 10 / 100058 -- 77 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid     1 / 115938 1 / 124664 0 / 11737 0 / 32606 1 / 115938 1 / 124664
uncharacterized tissue 19 / 207932 67 / 479819   1 / 51729 19 / 207932 67 / 479819 0 / 21833 1 / 51729
uterus 1 / 38063 8 / 133582 146 / 10193077 -- 1 / 38063 8 / 133582 146 / 10193077 --
vascular   -- 48 / 13135050 -- 0 / 46250 -- 48 / 13135050 --
white blood cells -- -- 11 / 846268 -- -- -- 11 / 846268 --
whole body -- -- -- -- -- -- -- --