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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.438289Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 283 / 3316537 210 / 2498449 2338 / 114162531 2991 / 109592465 283 / 3316537 210 / 2498449 2338 / 114162531 2991 / 109592465
adrenal cortex -- 2 / 9928 -- -- -- 2 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone   6 / 57865 -- 1 / 83577 0 / 16077 6 / 57865 -- 1 / 83577
bone marrow   2 / 29891 92 / 5047110 64 / 4978364 0 / 14774 2 / 29891 92 / 5047110 64 / 4978364
brain 22 / 506301 14 / 200215 17 / 729526 208 / 4997811 22 / 506301 14 / 200215 17 / 729526 208 / 4997811
cartilage   3 / 37226 -- 10 / 778035 0 / 15965 3 / 37226 -- 10 / 778035
cerebellum 5 / 90353   2 / 90885 53 / 1495938 5 / 90353 0 / 0 2 / 90885 53 / 1495938
cerebrum 7 / 198932   -- -- 7 / 198932 0 / 3422 -- --
cervix   6 / 44577 -- -- 0 / 3888 6 / 44577 -- --
colon 15 / 26551 21 / 151167 2 / 98089 9 / 643586 15 / 26551 21 / 151167 2 / 98089 9 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 18 / 246043   -- -- 18 / 246043 0 / 38 -- --
endocrine 2 / 19564   -- -- 2 / 19564 0 / 2857 -- --
esophagus   1 / 17290 -- -- 0 / 270 1 / 17290 -- --
eye 15 / 128826 3 / 46440 4 / 85898 467 / 12434232 15 / 128826 3 / 46440 4 / 85898 467 / 12434232
gastrointestinal tract 5 / 28803 1 / 12721 2 / 45908 -- 5 / 28803 1 / 12721 2 / 45908 --
heart 27 / 76442   18 / 83063 -- 27 / 76442 0 / 1 18 / 83063 --
kidney 16 / 106627 5 / 89898 3 / 155372 2 / 100281 16 / 106627 5 / 89898 3 / 155372 2 / 100281
limb -- -- -- -- -- -- -- --
liver 9 / 96846 12 / 107249 4 / 66308 2 / 214987 9 / 96846 12 / 107249 4 / 66308 2 / 214987
lung 5 / 128150 12 / 170663 6 / 159917 7 / 159059 5 / 128150 12 / 170663 6 / 159917 7 / 159059
lymph node 5 / 62650 3 / 27007 140 / 5278419 266 / 4863489 5 / 62650 3 / 27007 140 / 5278419 266 / 4863489
lymphoreticular 1 / 17836 5 / 44303 -- -- 1 / 17836 5 / 44303 -- --
mammary gland   6 / 104307 515 / 43166038 549 / 30312656 0 / 46553 6 / 104307 515 / 43166038 549 / 30312656
muscle 11 / 74039 3 / 27691 12 / 107836 1 / 61270 11 / 74039 3 / 27691 12 / 107836 1 / 61270
nervous 1 / 10333   -- -- 1 / 10333 0 / 8 -- --
ovary   10 / 89988 3 / 94887 3 / 179472 0 / 11462 10 / 89988 3 / 94887 3 / 179472
pancreas       3 / 189999 0 / 7237 0 / 74930 0 / 85728 3 / 189999
pancreatic islet 21 / 96524 18 / 30072 -- -- 21 / 96524 18 / 30072 -- --
parathyroid   3 / 20557 -- -- 0 / 24 3 / 20557 -- --
peripheral nervous system     -- -- 0 / 14891 0 / 645 -- --
pineal gland 1 / 6170 -- -- -- 1 / 6170 -- -- --
pituitary gland 3 / 13260   -- -- 3 / 13260 0 / 1358 -- --
placenta 18 / 241088 1 / 39531 2 / 207348 -- 18 / 241088 1 / 39531 2 / 207348 --
pooled tissue 26 / 276455   -- -- 26 / 276455 0 / 0 -- --
prostate 1 / 79993 14 / 107080 14 / 266949 33 / 491794 1 / 79993 14 / 107080 14 / 266949 33 / 491794
retina   -- 6 / 820326 4 / 88490 0 / 29438 -- 6 / 820326 4 / 88490
salivary gland 2 / 2490   -- -- 2 / 2490 0 / 10368 -- --
skin 14 / 73633 5 / 125377 535 / 26905847 725 / 34522313 14 / 73633 5 / 125377 535 / 26905847 725 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 2 / 52939   -- -- 2 / 52939 0 / 5 -- --
stem cell -- -- 110 / 6230144 -- -- -- 110 / 6230144 --
stomach 1 / 26641 7 / 65644 12 / 124767 13 / 448716 1 / 26641 7 / 65644 12 / 124767 13 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 9 / 143630 2 / 100058 -- 559 / 12372003 9 / 143630 2 / 100058 -- 559 / 12372003
thymus     -- -- 0 / 4478 0 / 165 -- --
thyroid   1 / 32606 7 / 115938 10 / 124664 0 / 11737 1 / 32606 7 / 115938 10 / 124664
uncharacterized tissue 7 / 207932 32 / 479819   2 / 51729 7 / 207932 32 / 479819 0 / 21833 2 / 51729
uterus 10 / 38063 12 / 133582 749 / 10193077 -- 10 / 38063 12 / 133582 749 / 10193077 --
vascular 2 / 46250 -- 76 / 13135050 -- 2 / 46250 -- 76 / 13135050 --
white blood cells -- -- 7 / 846268 -- -- -- 7 / 846268 --
whole body -- -- -- -- -- -- -- --