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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Virtual Northern

Expression Pattern for cluster Hs.436204Text Legend

TissueEST DataSAGE DataEST DataSAGE Data
NormalCancerNormalCancerNormalCancerNormalCancer
ALL TISSUES 520 / 3316537 487 / 2498449 3423 / 114162531 1901 / 109592465 520 / 3316537 487 / 2498449 3423 / 114162531 1901 / 109592465
adrenal cortex -- 1 / 9928 -- -- -- 1 / 9928 -- --
adrenal medulla --   -- -- -- 0 / 247 -- --
bone 4 / 16077 5 / 57865 -- 3 / 83577 4 / 16077 5 / 57865 -- 3 / 83577
bone marrow   1 / 29891 41 / 5047110 195 / 4978364 0 / 14774 1 / 29891 41 / 5047110 195 / 4978364
brain 149 / 506301 43 / 200215 23 / 729526 103 / 4997811 149 / 506301 43 / 200215 23 / 729526 103 / 4997811
cartilage 3 / 15965 2 / 37226 -- 13 / 778035 3 / 15965 2 / 37226 -- 13 / 778035
cerebellum 22 / 90353   4 / 90885 18 / 1495938 22 / 90353 0 / 0 4 / 90885 18 / 1495938
cerebrum 64 / 198932   -- -- 64 / 198932 0 / 3422 -- --
cervix 1 / 3888 15 / 44577 -- -- 1 / 3888 15 / 44577 -- --
colon 2 / 26551 29 / 151167 2 / 98089 9 / 643586 2 / 26551 29 / 151167 2 / 98089 9 / 643586
ear   -- -- -- 0 / 16130 -- -- --
embryonic tissue 21 / 246043   -- -- 21 / 246043 0 / 38 -- --
endocrine 3 / 19564   -- -- 3 / 19564 0 / 2857 -- --
esophagus   4 / 17290 -- -- 0 / 270 4 / 17290 -- --
eye 16 / 128826 8 / 46440 1 / 85898 85 / 12434232 16 / 128826 8 / 46440 1 / 85898 85 / 12434232
gastrointestinal tract 8 / 28803 3 / 12721 1 / 45908 -- 8 / 28803 3 / 12721 1 / 45908 --
heart 5 / 76442     -- 5 / 76442 0 / 1 0 / 83063 --
kidney 12 / 106627 23 / 89898 6 / 155372   12 / 106627 23 / 89898 6 / 155372 0 / 100281
limb -- -- -- -- -- -- -- --
liver 7 / 96846 17 / 107249   1 / 214987 7 / 96846 17 / 107249 0 / 66308 1 / 214987
lung 20 / 128150 30 / 170663 4 / 159917 5 / 159059 20 / 128150 30 / 170663 4 / 159917 5 / 159059
lymph node 5 / 62650 4 / 27007 127 / 5278419 11 / 4863489 5 / 62650 4 / 27007 127 / 5278419 11 / 4863489
lymphoreticular 4 / 17836 5 / 44303 -- -- 4 / 17836 5 / 44303 -- --
mammary gland 2 / 46553 9 / 104307 2186 / 43166038 771 / 30312656 2 / 46553 9 / 104307 2186 / 43166038 771 / 30312656
muscle 5 / 74039 11 / 27691 4 / 107836 3 / 61270 5 / 74039 11 / 27691 4 / 107836 3 / 61270
nervous 2 / 10333   -- -- 2 / 10333 0 / 8 -- --
ovary 2 / 11462 5 / 89988 2 / 94887 11 / 179472 2 / 11462 5 / 89988 2 / 94887 11 / 179472
pancreas   6 / 74930 2 / 85728 5 / 189999 0 / 7237 6 / 74930 2 / 85728 5 / 189999
pancreatic islet 1 / 96524 7 / 30072 -- -- 1 / 96524 7 / 30072 -- --
parathyroid   2 / 20557 -- -- 0 / 24 2 / 20557 -- --
peripheral nervous system 2 / 14891   -- -- 2 / 14891 0 / 645 -- --
pineal gland   -- -- -- 0 / 6170 -- -- --
pituitary gland 1 / 13260   -- -- 1 / 13260 0 / 1358 -- --
placenta 32 / 241088 6 / 39531   -- 32 / 241088 6 / 39531 0 / 207348 --
pooled tissue 25 / 276455   -- -- 25 / 276455 0 / 0 -- --
prostate 13 / 79993 9 / 107080 4 / 266949 4 / 491794 13 / 79993 9 / 107080 4 / 266949 4 / 491794
retina 10 / 29438 -- 20 / 820326   10 / 29438 -- 20 / 820326 0 / 88490
salivary gland   4 / 10368 -- -- 0 / 2490 4 / 10368 -- --
skin 10 / 73633 18 / 125377 429 / 26905847 398 / 34522313 10 / 73633 18 / 125377 429 / 26905847 398 / 34522313
soft tissue --   -- -- -- 0 / 3 -- --
spleen 21 / 52939   -- -- 21 / 52939 0 / 5 -- --
stem cell -- -- 43 / 6230144 -- -- -- 43 / 6230144 --
stomach 1 / 26641 5 / 65644 1 / 124767 6 / 448716 1 / 26641 5 / 65644 1 / 124767 6 / 448716
synovium     -- -- 0 / 249 0 / 1650 -- --
testis 16 / 143630 31 / 100058 -- 258 / 12372003 16 / 143630 31 / 100058 -- 258 / 12372003
thymus 1 / 4478   -- -- 1 / 4478 0 / 165 -- --
thyroid 4 / 11737 4 / 32606   1 / 124664 4 / 11737 4 / 32606 0 / 115938 1 / 124664
uncharacterized tissue 19 / 207932 78 / 479819 1 / 21833 1 / 51729 19 / 207932 78 / 479819 1 / 21833 1 / 51729
uterus   102 / 133582 369 / 10193077 -- 0 / 38063 102 / 133582 369 / 10193077 --
vascular 5 / 46250 -- 134 / 13135050 -- 5 / 46250 -- 134 / 13135050 --
white blood cells -- -- 19 / 846268 -- -- -- 19 / 846268 --
whole body -- -- -- -- -- -- -- --